KEGG   Rossellomorea aquimaris: U9J35_10160
Entry
U9J35_10160       CDS       T09670                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
raz  Rossellomorea aquimaris
Pathway
raz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:raz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    U9J35_10160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:raz03019]
    U9J35_10160
Messenger RNA biogenesis [BR:raz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     U9J35_10160
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: WRP08496
LinkDB
Position
1986700..1988367
AA seq 555 aa
MSKTKNESIKIIPLGGVGEIGKNMYVIEVDDEIFVVDAGLMFPENEMLGIDIVIPDIQYL
IENKERVKGIFLTHGHEDSIGAISYVLNKIKAPVYGTRLTNALVKARLKDENVREDVKFY
TIHSDSHLTFDGVNVTFFKTTHSIPDSVGVCIHTSEGVIVHTGEFKFDQSAKHLYRPDLG
KMAQIGEKGVLCLLSDSKEAERPGYTTSEAVIEQHITDALRMASGRVIVACFASNLIRLQ
QVFDAADQNNRKVVVVGKSLKRVYDIALKLGYLHVRDEMIIGMDEIGDYPKDEVVIIATG
TQGEPFEALQRMSKRSHRLVNIEEGDTVLITASPSPGMEVIAGKTIDMLYRAGANVLTAN
KKVHVSGHGSQEDLKFMLNIMKPKYFIPIQGEYKMLVAHTQIAHDIGLPYKQIFILDKGD
VLQYKDVKMRMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSEDGVFTVVVTINRRTKSI
VSGPEIISRGFVYVRESEELIEGAGSIVTDVVHSYLQKGSFEWTTIKQDIRDQLNYYLFN
KTRRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
gtgagtaagacaaagaatgaaagtataaagatcataccgctcggaggagtaggagaaatt
ggcaagaacatgtacgtgatcgaagtggatgatgagattttcgtggttgatgcagggctg
atgttccctgaaaatgaaatgctcggaattgatatcgtcattcctgacattcaatacttg
atcgaaaataaagaacgcgtgaaaggaatctttttgactcatggacatgaggatagtatt
ggagcgatttcatacgtactcaataagattaaagcacctgtttacggcacccgtttaacg
aatgctcttgtaaaggcccgtttgaaggatgaaaatgtcagggaagatgtgaaattctat
acgattcactcagatagccatctaacttttgatggagtgaatgtcacgttctttaaaacc
acacatagtattccggattcagttggtgtatgtatacatacatctgaaggggtcatcgta
cataccggggaattcaaatttgatcaatccgctaaacacctgtatcgaccggatttaggc
aaaatggctcaaatcggtgaaaaaggagtgctatgtttgttgtctgacagcaaagaagcg
gaaagacccggctacacaacatccgaggccgtcattgaacaacatataacagacgcttta
cgaatggcatccggtagagtgattgtagcttgctttgcatctaatctaattcgactacag
caagtttttgacgctgcagatcaaaataatcgtaaagtggtcgtagtgggtaagagtttg
aagagagtatatgatatcgcattgaaattaggctatcttcacgtccgggatgagatgatc
atcggaatggatgagattggtgattatcctaaagatgaagtcgtcatcatcgccaccgga
acacaaggagaaccgtttgaagcattgcagcggatgtcaaaacggtcccatcgtcttgtg
aatatcgaagaaggagacacagtccttattacggcttcaccttcgcctggcatggaagtc
attgcaggaaagacaattgacatgctttatagagcaggagcaaacgtcttgaccgctaat
aagaaggttcatgtttcagggcatgggagtcaggaagatcttaagtttatgttaaatatc
atgaaaccgaagtatttcattcctatacaaggtgagtataaaatgctggtggcccatacc
cagatcgctcacgatatcggtcttccgtataagcagattttcattttggataaaggagat
gtgcttcaatacaaggacgttaagatgagaatgagcggccgggtccaggcagggaatgtg
ttaatcgatggaatcggtgtaggggacgtagggaatatcgtccttcgcgatcgtaaacta
ttatcagaagacggtgtctttacggtcgttgtgacaatcaaccgcagaaccaaatcgatt
gtgtcaggtcctgagattatatcacgcggctttgtttatgtgagggagtcagaagaattg
attgaaggagctggaagcatcgtaacggatgtagtacattcctacttacaaaagggctct
tttgaatggacaaccattaaacaggatatcagagatcagctcaattactatttattcaat
aaaacacgaagaagaccaatgatattaccgatcatcatggaagtttaa

DBGET integrated database retrieval system