Rossellomorea aquimaris: U9J35_10160
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Entry
U9J35_10160 CDS
T09670
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
raz
Rossellomorea aquimaris
Pathway
raz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U9J35_10160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raz03019
]
U9J35_10160
Messenger RNA biogenesis [BR:
raz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U9J35_10160
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WRP08496
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Position
1986700..1988367
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AA seq
555 aa
AA seq
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MSKTKNESIKIIPLGGVGEIGKNMYVIEVDDEIFVVDAGLMFPENEMLGIDIVIPDIQYL
IENKERVKGIFLTHGHEDSIGAISYVLNKIKAPVYGTRLTNALVKARLKDENVREDVKFY
TIHSDSHLTFDGVNVTFFKTTHSIPDSVGVCIHTSEGVIVHTGEFKFDQSAKHLYRPDLG
KMAQIGEKGVLCLLSDSKEAERPGYTTSEAVIEQHITDALRMASGRVIVACFASNLIRLQ
QVFDAADQNNRKVVVVGKSLKRVYDIALKLGYLHVRDEMIIGMDEIGDYPKDEVVIIATG
TQGEPFEALQRMSKRSHRLVNIEEGDTVLITASPSPGMEVIAGKTIDMLYRAGANVLTAN
KKVHVSGHGSQEDLKFMLNIMKPKYFIPIQGEYKMLVAHTQIAHDIGLPYKQIFILDKGD
VLQYKDVKMRMSGRVQAGNVLIDGIGVGDVGNIVLRDRKLLSEDGVFTVVVTINRRTKSI
VSGPEIISRGFVYVRESEELIEGAGSIVTDVVHSYLQKGSFEWTTIKQDIRDQLNYYLFN
KTRRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagacaaagaatgaaagtataaagatcataccgctcggaggagtaggagaaatt
ggcaagaacatgtacgtgatcgaagtggatgatgagattttcgtggttgatgcagggctg
atgttccctgaaaatgaaatgctcggaattgatatcgtcattcctgacattcaatacttg
atcgaaaataaagaacgcgtgaaaggaatctttttgactcatggacatgaggatagtatt
ggagcgatttcatacgtactcaataagattaaagcacctgtttacggcacccgtttaacg
aatgctcttgtaaaggcccgtttgaaggatgaaaatgtcagggaagatgtgaaattctat
acgattcactcagatagccatctaacttttgatggagtgaatgtcacgttctttaaaacc
acacatagtattccggattcagttggtgtatgtatacatacatctgaaggggtcatcgta
cataccggggaattcaaatttgatcaatccgctaaacacctgtatcgaccggatttaggc
aaaatggctcaaatcggtgaaaaaggagtgctatgtttgttgtctgacagcaaagaagcg
gaaagacccggctacacaacatccgaggccgtcattgaacaacatataacagacgcttta
cgaatggcatccggtagagtgattgtagcttgctttgcatctaatctaattcgactacag
caagtttttgacgctgcagatcaaaataatcgtaaagtggtcgtagtgggtaagagtttg
aagagagtatatgatatcgcattgaaattaggctatcttcacgtccgggatgagatgatc
atcggaatggatgagattggtgattatcctaaagatgaagtcgtcatcatcgccaccgga
acacaaggagaaccgtttgaagcattgcagcggatgtcaaaacggtcccatcgtcttgtg
aatatcgaagaaggagacacagtccttattacggcttcaccttcgcctggcatggaagtc
attgcaggaaagacaattgacatgctttatagagcaggagcaaacgtcttgaccgctaat
aagaaggttcatgtttcagggcatgggagtcaggaagatcttaagtttatgttaaatatc
atgaaaccgaagtatttcattcctatacaaggtgagtataaaatgctggtggcccatacc
cagatcgctcacgatatcggtcttccgtataagcagattttcattttggataaaggagat
gtgcttcaatacaaggacgttaagatgagaatgagcggccgggtccaggcagggaatgtg
ttaatcgatggaatcggtgtaggggacgtagggaatatcgtccttcgcgatcgtaaacta
ttatcagaagacggtgtctttacggtcgttgtgacaatcaaccgcagaaccaaatcgatt
gtgtcaggtcctgagattatatcacgcggctttgtttatgtgagggagtcagaagaattg
attgaaggagctggaagcatcgtaacggatgtagtacattcctacttacaaaagggctct
tttgaatggacaaccattaaacaggatatcagagatcagctcaattactatttattcaat
aaaacacgaagaagaccaatgatattaccgatcatcatggaagtttaa
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