KEGG   Rossellomorea aquimaris: U9J35_11120
Entry
U9J35_11120       CDS       T09670                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
raz  Rossellomorea aquimaris
Pathway
raz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:raz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    U9J35_11120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:raz03019]
    U9J35_11120
Messenger RNA biogenesis [BR:raz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     U9J35_11120
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 ODP Lactamase_B_6 DUF5805
Other DBs
NCBI-ProteinID: WRP08679
LinkDB
Position
complement(2191034..2192707)
AA seq 557 aa
MHTNEQALSIFALGGINEIGKNMYVIQHRDDIIIIDCGGKFPDESLLGIDLIIPDVTYLE
KNKDKIRGLIVTHGHEDHIGGIPYLLKKINMPIYATHFTLGLIELKLEEHRLIRETKLVT
IDSDSNLNLGTIDVSFFKVSHSIPDCLGIVFHTPEGNVVHTGDFKFDLTPANHQYSDIHK
MARIGDEGVLVLLSESTNAERGGLTPSEQMVGNHMDEAFLKATGKIFVSTFASNVNRVQQ
VVDASIKTNRRLALLGRSMINVVSVAMERGYLTVPDGMLIDAREIDALPPEKVAILCTGS
QGEPRAALGRLSTGSFRDVYVYPGDTVILAASPIPGNEKDVSRILDHLFQLGAHVIYGSG
STTGMHVSGHGYQEDLKLMLTLMKPTYFIPIHGEYRMLHHHRILAESVGVETGNTFIIKN
GEVVDFENSVARQTRTIPAGDTFVDGLSVGDIGSIVLRDRKQLSEDGMLIIVITLSKSEH
SIISGPDTISRGFIFVRNSEDLLKDVNHLVKKVVDELSAENIRDWKEMKQAIKKDVGQYL
FKHLKRKPMILPIIIEV
NT seq 1674 nt   +upstreamnt  +downstreamnt
ttgcataccaatgaacaggcattatccatttttgcacttggcgggatcaatgaaatcgga
aaaaacatgtatgtcattcaacaccgtgatgatattatcatcatcgattgtggaggtaag
tttcctgatgaaagtcttttgggaatcgacttaatcattcccgatgttacttaccttgaa
aaaaacaaagataaaatacggggattaatcgtcactcatggccacgaggaccacataggt
ggcattccatatcttctgaaaaagattaacatgcccatttatgcaacacatttcaccctg
ggactgatcgaactaaaattagaagagcacaggcttataagagagacgaaacttgtaacc
atcgactcggattccaacctgaatttaggaacgatcgatgtatcattcttcaaggtcagt
cacagcattccggattgtttaggtattgtatttcatacgccggaaggaaatgtcgtacat
actggagactttaagttcgatttaacacctgccaatcatcaatactcagatattcataaa
atggccaggatcggtgatgaaggggtattggtcttactttctgaaagcaccaatgcggag
cggggaggcttgaccccttctgaacaaatggtggggaatcatatggatgaagcgttcttg
aaagccactggaaaaatctttgtctcaacctttgcttcgaatgtcaaccgggtccaacag
gtagtcgatgcttccatcaagacaaacaggaggctggcattattaggaaggagcatgatc
aatgtagtttcagtcgccatggaacggggatatttaaccgtgcctgacggaatgctgatc
gatgcccgtgaaattgatgcattacctcccgaaaaggttgcaattttatgtacgggaagt
caaggggaacccagggctgcactgggtcgcctttcgactggaagcttccgggacgtatac
gtttatccaggcgatactgtcattctggctgcttcacctataccaggaaacgaaaaggat
gtatcacgtattctggatcatttatttcaactaggtgcccacgtgatttacggaagtgga
agtacaacagggatgcatgtatctggacacgggtatcaagaagacttaaaactcatgcta
acattaatgaagccgacttactttattcctatacatggtgaataccgaatgctgcatcat
cacagaatcctggctgaatcggtaggagtagaaacaggaaatacttttataataaaaaac
ggtgaagtcgtcgatttcgagaattccgttgcgcggcaaacgcgaaccattcctgcagga
gatacctttgtagatggcttgagcgtcggagatattggatcaattgtgttacgtgatcga
aaacagctttctgaagatggaatgcttatcattgtcattacccttagtaagtcggagcat
tcgattatttctgggcccgataccatatcacggggattcatttttgtacgaaactcagaa
gacctattaaaggacgtaaaccatctcgttaaaaaagttgtagatgaattgtctgcagaa
aacattcgcgactggaaagaaatgaaacaggcgatcaaaaaagacgtaggtcaataccta
ttcaagcatttgaagaggaaacctatgatattaccgattattattgaagtgtag

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