Rossellomorea aquimaris: U9J35_12875
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Entry
U9J35_12875 CDS
T09670
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
raz
Rossellomorea aquimaris
Pathway
raz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U9J35_12875 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raz03019
]
U9J35_12875 (recQ)
03400 DNA repair and recombination proteins [BR:
raz03400
]
U9J35_12875 (recQ)
Enzymes [BR:
raz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U9J35_12875 (recQ)
Messenger RNA biogenesis [BR:
raz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U9J35_12875 (recQ)
DNA repair and recombination proteins [BR:
raz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U9J35_12875 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Myb_DNA-binding
zf-CXXC
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
WRP04810
LinkDB
All DBs
Position
complement(2534103..2536226)
Genome browser
AA seq
707 aa
AA seq
DB search
MIVEAKQVLKQYFGYDEFRDGQASIIEYILDGKNTVGIMPTGGGKSLCYQIPALMLDGVT
LVISPLISLMKDQVDSLIHQGIPATYINSTLSNSEVDTRMEEISLGEYKLVYIAPERLES
FGFIRFLNTLPIPLVAVDEAHCLSQWGHDFRPSYLGIYNAVNQLQSNPTILALTATATPQ
VQADILHHLHIPDQHKVLTGFQRTNLFFQVVKGEDRKRWVEKYVQKNHQHSGIIYCATRK
EVENLYLHFQKKGMSVGKYHGGLSDTLRQEQQEAFLNDSIGIMIATNAFGMGINKSNVRY
VIHYQIPKNMEGYYQEAGRAGRDGIESECVLLFSPQDIQTQRYIIDQNIVNQELHDNEMQ
KLRDMIDFVHTEACLQNYILSYFGEQVDHACGHCSNCLDERESEDVTREAQMVLSCMMRM
NERFGTSLISGVLTGSRGKKILEWGFDRLSTYGLMKNQSQKEVGLFIDYLISEGIIQVEG
GSFPVLKVSSKGKEVLMGDRKVARKVQPTVSAIIHKEDGLFQALRILRKSIADSVGVPPF
VIFSDKSLQDMCVKMPKTPVEFLQVSGVGENKLIRYGEVFIKEISSFLDDNPEHEVEVDK
TAPPRKTSKSDTASYLISYQLFKDNKDIKDIAKERGMNTATIENHIIRAYQEGITNDWTI
LFTEEEETLIEDAVQKVGTDLLKPIKEELPKKISYFQIKGYLVKHGQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtagaagcaaaacaagtattaaagcagtactttggatatgacgaatttagagat
ggacaagcgagcattatcgaatacatacttgatggaaaaaatacagtaggtatcatgccg
acaggaggaggtaaatcgctctgttaccaaattcccgctctaatgcttgatggagttaca
ctcgtaatctctccactcatatctttaatgaaagaccaggtggattcgttaattcatcaa
gggattccagcaacctatattaatagtacgctatccaatagtgaagtagacacaaggatg
gaagagatttctttaggtgaatacaaactcgtttatattgctcctgagagattggagtca
tttgggtttattcgattcctcaatacattacccatcccccttgtagctgtagatgaagcc
cattgtttatcccaatggggccatgatttcagaccaagctatttagggatttataacgct
gttaatcaactacaatcaaatcccaccattcttgctctgaccgcgactgcaactccgcag
gtacaagctgatatccttcatcatttacatattccagatcaacataaagtactaactggt
tttcaacggacgaatttattcttccaagttgtaaaaggtgaagatcgtaagcgttgggta
gagaagtatgttcaaaaaaatcatcagcactcgggcattatttattgtgcaactcgaaag
gaagtggaaaatctttatctgcattttcagaaaaaaggcatgtctgttgggaaatatcat
ggaggactatctgatacattgagacaagaacaacaagaagcttttctgaatgattcgata
gggattatgattgccaccaatgcatttggcatgggaataaacaaatcaaatgtacgttat
gtgattcattatcaaattcctaagaatatggaaggatattatcaagaagccggaagagct
ggtcgtgacggaattgaaagtgaatgtgttttgttattttcacctcaagatatccagacc
caacgatacattatcgatcaaaatattgtgaatcaagaactgcatgataatgaaatgcag
aaactgcgtgatatgattgactttgtccatacagaagcatgcttacagaactatatttta
tcgtactttggagaacaggttgatcatgcttgcggtcattgcagcaattgcttagatgaa
agagaatcagaggatgtaacgagagaggctcaaatggtattgtcctgtatgatgaggatg
aatgagagatttggaacttcacttattagtggtgtactcaccggttcaagaggaaaaaaa
atattggagtgggggtttgaccggttatccacgtatggcttaatgaagaatcagtcccag
aaggaagttggactgtttatcgattacttgatttctgaaggtatcatacaagttgaaggt
gggagctttccggtactaaaggtttcctcaaaagggaaagaagtgttaatgggggataga
aaagttgccaggaaggtccaaccaacggtttcagctatcatccataaagaagatggcttg
ttccaagctcttcgaattcttcggaagtcaattgcagattctgtaggggtcccgccattc
gttattttctcagataagtctttacaggatatgtgtgtgaagatgccgaaaacacctgtt
gaattcctccaagtgagcggggtgggggaaaacaagctgattcggtatggagaagttttc
atcaaggaaatctcttcctttttagatgacaatccagagcatgaagtcgaagtggacaaa
actgcaccaccacgcaagacaagtaaatctgacacggcttcctatttgatcagctatcag
ttattcaaggataacaaggatattaaagacattgcgaaagaacggggaatgaatacagca
acgattgaaaatcacattatccgtgcctatcaggaaggcatcacgaatgactggaccatc
ctctttacagaagaagaagaaacacttattgaagacgcagttcaaaaagtggggacggac
ctcttaaagcctattaaagaagaattaccgaaaaaaataagctattttcagattaaagga
tacttggttaaacatggtcaataa
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