Rossellomorea aquimaris: U9J35_15840
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Entry
U9J35_15840 CDS
T09670
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
raz
Rossellomorea aquimaris
Pathway
raz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U9J35_15840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raz03400
]
U9J35_15840
Enzymes [BR:
raz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U9J35_15840
DNA repair and recombination proteins [BR:
raz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U9J35_15840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_12
AAA_16
AAA_22
DEAD
NTPase_1
T2SSE
AAA_5
nSTAND3
MCM4_WHD
UvrD_C
AAA_29
Mg_chelatase
AAA
AAA_28
AAA_18
NPHP3_N
HHH
DUF4926
TsaE
AAA_17
Motif
Other DBs
NCBI-ProteinID:
WRP05375
LinkDB
All DBs
Position
complement(3084586..3086979)
Genome browser
AA seq
797 aa
AA seq
DB search
MSQQDSLKLFGEEETYIKGRHLVTIFHNEENLYTVVRIRVDETNDSYEDKEAVVTGNFPK
IHEDETYVFYGRFQEHPKFGMQFHAKHFKKEIPQTTQGVVHYLSSDLFKGIGKKTAEKIV
EHIGENAITKILENPSLLDEIPKLPKEKAKSIYDTLSEHQGLERVMIMLNDLGFGPQISM
KVYQAYKEQALEIIQNNPYKLVEDIEGIGFTRADEIGSKIGLTGSHPDRIKAGCLYTLEQ
TCVKQGHVYLEAEELIVTVKELLEKSQPEKVDYTEISSQLVSLEEEGKVIGEGTKVYVPS
LYFSEKGIVTNIEKILSQTQYEDQFPQSEFLLSLGALEDRLEVQYAPSQKQAIETALMSP
MLLLTGGPGTGKTTVIQGIVELFADLHGCSLDPKDYKDEPFPVLLTAPTGRAAKRMTEST
GLPAMTIHRLLGWNGQEGFQSDEERAIEGKLLIVDEVSMVDTWLAHQLLKALPEDIQVIF
VGDEDQLPSVGPGQVLKDLLKSEVVPTVRLTDIYRQEEGSSIIELAHYMKRGQVPADLTK
QQKDRSFFPCRTNQISEVVQKVVENAKKKGYSPKDIQVLAPMYRGPAGIDRLNELLQEIF
NSNDGTRKEIAFGDVKYRIGDKVLQLVNQPENNVFNGDIGEIVSIFYAKENTEKQDMIIV
SYEGNEVTYTRQDLMQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITRS
KQFLILCGELDAFTLGVEREDDFLRKTTLSEKLRGLTDAEENTAVSPEDGLPIEEFLLNE
DPMIGMEGISPYDFMKV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagcaagattctttaaagctgtttggtgaggaagaaacctatataaaaggaagg
caccttgtcaccatttttcataatgaggaaaatctctataccgtggtccggatccgggtg
gacgaaacgaatgattcttatgaagacaaagaagcggtcgtaaccgggaatttcccaaag
atacatgaagatgagacctatgtattttacggaaggtttcaagaacatccaaagtttggc
atgcagtttcatgcgaagcatttcaagaaagaaatcccacaaaccacacaaggtgtcgtc
cattatttatcaagtgatttatttaaaggaatcgggaagaaaacagctgagaagatagtg
gagcatatcggggaaaacgccatcaccaaaatactcgaaaatccaagcctcctggatgaa
attccaaaacttccaaaggaaaaggcgaaaagtatttatgatacgctttccgagcatcaa
ggcttggagcgggtcatgatcatgctgaatgatctggggtttggaccccaaatttccatg
aaggtctatcaagcctataaagagcaggcgcttgagatcattcaaaataacccctataag
ctcgtggaagatattgaaggaatcggctttacccgggccgatgagattggttctaagatt
ggtttgactggcagtcatcccgaccggatcaaagcaggctgtttatacacccttgaacaa
acatgtgtaaagcagggccatgtatatctcgaggcagaagaactcattgtaacggtgaag
gagctccttgagaaaagtcagcccgaaaaggtcgattacactgaaatatccagtcaactg
gtttctttggaggaagaggggaaagtcattggagaaggcacaaaagtgtatgttccttct
ctttacttctcggaaaaagggatcgtgacaaacatcgaaaagattttgtcacaaacccaa
tatgaagatcaatttcctcaatccgaattccttctgtcacttggagcactggaggaccga
ttggaagttcaatacgcaccttcccaaaaacaagccatcgaaacagcattgatgtccccc
atgcttctgttgaccggaggacccggtactggtaagacgaccgtcattcaggggattgtc
gagctgtttgctgatctccatggctgctccttggatccaaaggattacaaagatgaaccc
ttccctgtcttactgacagccccgactggtcgagcggcgaagcgaatgacagaatccacg
ggcctccctgccatgacgattcatcgtcttttaggctggaacggtcaagaaggatttcag
agtgatgaagaacgggcgattgaaggaaagttgttaattgtggatgaagtgtccatggtc
gacacatggcttgcccatcaattattgaaggccctgcctgaagatattcaagtgatattt
gtcggggatgaggatcaattaccgtctgtgggtcccggccaggtactaaaggatctattg
aaatcggaagtggtgccgacagtcaggttaacggatatttatagacaggaagagggctct
tccattattgaacttgctcactatatgaaaaggggccaggttcctgcagatctgaccaaa
cagcaaaaggatcgatccttcttcccatgcagaaccaatcaaatctccgaagtcgttcaa
aaagtcgttgagaacgcgaagaaaaaaggatactccccaaaagatatacaggtcctcgcc
cctatgtatcgaggccctgcaggtatcgatcgattgaatgaactccttcaggaaatcttc
aatagcaatgacggtacccggaaagagatcgcctttggagatgtgaaatatcgtattggg
gataaggtgcttcagctggtcaatcagcctgaaaacaatgttttcaacggagatatcggt
gaaatcgtctctatcttttatgcaaaggaaaacaccgagaagcaagatatgatcattgtt
tcatatgaaggaaatgaggtcacttatacgaggcaggatctcatgcaaattacccatgcg
tattgctgctcgatccataagtcacaaggaagtgagtttcccattgtgattttacctgtc
gtgaaaagctattatcgcatgctgagaagaaatcttctttacactgccatcaccaggagc
aagcaattcctcattctttgtggagagcttgatgcttttacccttggagtggagagagaa
gatgattttctccgcaaaacaaccctaagcgaaaaactgagaggcttaaccgatgctgaa
gagaacacggcagtttcgccagaagatggtttacccattgaagaattcttgctgaatgag
gatccaatgataggaatggaaggcatcagcccctatgatttcatgaaagtataa
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