Rossellomorea aquimaris: U9J35_19535
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Entry
U9J35_19535 CDS
T09670
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
raz
Rossellomorea aquimaris
Pathway
raz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J35_19535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raz03000
]
U9J35_19535
Transcription factors [BR:
raz03000
]
Prokaryotic type
Helix-turn-helix
Other families
U9J35_19535
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_2
Fis1_TPR_C
TPR_19
ARM_TT21_5th
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WRP06050
LinkDB
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Position
complement(3834826..3836055)
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AA seq
409 aa
AA seq
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MHTGTFIKYYRIFKGMTQKQVGDGICTPGHISKIESGHLQITEDKIKLFNQRLNINVEKE
LKAYKKLQLDLELWHDVMIKQVNGKIELLKETIEQNPLTKIETLNGTFKLLKARYFIMKG
EVKEAAFYLSQFSNKRLSFHMFDYDFQLFYHIRGMYELAKGNPQTALKYLEKIDRDIYAN
PEAYYYMSVGYHDLGQHDKSLEYSQLALNYFKETFNFTRCVDAATIQLVAEGRSEESSLA
MLVEKYDELIQHCDNLHDHRRKAVLHLNLGTLYRDVFDDRKARDAFQMAYGLLKHESDKE
MYANSLFGYIDSSMNVDGSANVEKYASLIEEGQASVRDIKNPCMETFFTMLEIRVHEGEQ
AYYQYVENVLIPLLKEEGQYAQCNYYIQKLYTHNQMDGKEIKGKECVLS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgggacatttattaagtattataggatctttaaggggatgacccaaaagcag
gtgggagatgggatctgtacccctggacatatcagtaagattgaaagcggacacttacag
attacggaagataaaattaaattgttcaatcaaaggttaaatattaacgttgagaaagag
ttaaaggcgtataaaaaattacaattagatttggaattgtggcatgatgtcatgatcaag
caggtaaacggaaaaattgaattattgaaggagaccatcgaacaaaatcccttaaccaaa
attgaaaccctgaatggtacctttaagctactgaaagcaaggtactttatcatgaaaggg
gaggtgaaagaagctgcattctatttaagtcagttttctaataagcgtctgtccttccat
atgttcgattacgattttcagttgttttaccatattagaggcatgtatgagcttgcaaaa
ggaaatccacaaacagccctgaagtatttggagaaaatagatcgagatatttatgcaaac
cctgaagcctactattatatgtcagttggctaccatgatcttgggcagcatgacaagtcc
ctggaatatagtcagctggctctgaactatttcaaggaaacgtttaattttacaagatgt
gtagacgctgctacgattcagttggtagcggaaggcagaagcgaagaatcgagtctggcc
atgttggtagagaaatatgatgagttgatccaacattgtgataatctgcatgatcatagg
agaaaagccgttcttcacctgaatttggggactctttatcgagatgtctttgatgataga
aaggcaagagatgcatttcaaatggcatatggattattgaagcatgagtccgataaagaa
atgtatgcaaacagcctttttggttatattgatagttccatgaatgtagatggttccgca
aatgttgaaaaatatgcaagtctaatagaagagggacaggcatctgtgagagatataaaa
aacccctgcatggaaacattctttacgatgcttgagatcagggttcatgagggagagcaa
gcatactatcaatatgtagagaatgtcctcatccccctattgaaggaagaagggcaatac
gctcagtgcaactattatatccaaaagctgtacacacataatcaaatggatggaaaagag
ataaaaggaaaagaatgcgttctaagctaa
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