Rossellomorea aquimaris: U9J35_19555
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Entry
U9J35_19555 CDS
T09670
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
raz
Rossellomorea aquimaris
Pathway
raz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J35_19555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raz03000
]
U9J35_19555
Transcription factors [BR:
raz03000
]
Prokaryotic type
Helix-turn-helix
Other families
U9J35_19555
BRITE hierarchy
Motif
Pfam:
HTH_3
HTH_31
HTH_19
YycC
TPR_12
Motif
Other DBs
NCBI-ProteinID:
WRP06054
LinkDB
All DBs
Position
complement(3838848..3840086)
Genome browser
AA seq
412 aa
AA seq
DB search
MSLGLLIKFYREKKELTQEELGKGICSVTHISKIERGNTQYSPEITHMLSEKLGIDLEKE
MQSLQKYERLLEQWHDSMVLQQISEIERLKDEVEKNSLFLIQSVKNKYFLLQSRYNLLQG
NITQAETLLDKMNKHRKELNTYELHLLHHLLGITAGIKGDFKKSLEYLLQINEKEYLNHE
FFYQIAIAYHNLQFKVKAYYYSEVALDYFRKTNNFKKVIDAETIKLINEGRNELWDFEEL
VERYNRLIAQCDIINETSKKAALLSNLAYEHSYVENNEKAKMYYRKTLSLLEKNQKSPIY
LNNLIGYVYCSLHIEGKQEEQDLKLLIETGTQFAKEINDQSSFLFFKMLRLLHEDKKELY
YQFIEEKIIPMLEGSGKHQQLHSYEKTMYQHYLDKGNQEKALLYAGRLIENC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaggattacttataaaattttacagagagaaaaaagaactgacccaggaagaa
ctgggaaaagggatttgttccgttactcatatcagtaaaattgagcgtggcaacacccaa
tattctcctgaaatcacgcatatgctaagcgagaaactcggaatcgatctggaaaaggaa
atgcagtcccttcagaaatatgagcgattgcttgagcaatggcacgatagcatggtttta
caacaaataagtgagattgaacgtttaaaagacgaggtagaaaagaattcattatttctc
atccaatctgttaagaataagtattttttattacaatccagatacaaccttttgcaaggg
aacatcacccaagcagaaacgctgctggataaaatgaataaacaccgtaaagaattaaac
acgtatgaacttcacctgcttcatcaccttctcggaatcacagcaggaataaaaggagac
ttcaagaagtcactcgaatatcttcttcaaatcaatgaaaaagaatatttaaatcacgaa
ttcttctatcaaatcgccatcgcctatcataacctccaatttaaagtaaaggcctattac
tatagtgaagtcgcacttgattacttcaggaaaacgaataattttaaaaaggtcattgat
gctgaaacaattaagttgataaacgaaggaagaaacgaactttgggatttcgaggaactc
gtagaacggtataatcgtttaatcgcacagtgtgatattattaatgaaacgtcaaaaaaa
gcggctttattaagcaacttagcatacgaacactcgtatgttgagaacaatgaaaaggca
aaaatgtactacaggaagacgttatctttattggagaagaaccaaaagtcacctatctat
cttaataatctgattggatacgtttactgcagtttacatatcgaaggaaagcaagaagaa
caggatctcaaactactgatagagacaggtactcaattcgcgaaggaaattaacgatcaa
agcagttttctattctttaaaatgctccgcttgttacatgaggataaaaaagagttgtat
tatcagtttattgaagaaaaaatcattcccatgcttgaggggagcggaaaacatcaacag
ctgcattcgtatgaaaaaacgatgtatcaacattatttagataagggaaatcaagagaaa
gcccttctttatgcaggtagattaattgaaaattgttaa
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