Rossellomorea aquimaris: U9J35_19575
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Entry
U9J35_19575 CDS
T09670
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
raz
Rossellomorea aquimaris
Pathway
raz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J35_19575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raz03000
]
U9J35_19575
Transcription factors [BR:
raz03000
]
Prokaryotic type
Helix-turn-helix
Other families
U9J35_19575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_12
TPR_2
TPR_10
TPR_8
TPR_MalT
TPR_1
DUF7833
YuzK
Motif
Other DBs
NCBI-ProteinID:
WRP06058
LinkDB
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Position
complement(3853325..3854596)
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AA seq
423 aa
AA seq
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MSIGRIIYYHRKKQNKTQEQLCKGICSTTHLSKIENSSKEGNLETLELLCKRLGVSIEEE
TAKTLYLKRQLAQFYEAIERLHRDHAERLYQELQRNKDYIQCTEMVYLFELYMLRYQLFT
NNPTEYEQASLGLKKNMSKFSSFEKYLWEFFQGIYYGQKQQYSKALSIFDQIEDRADLYS
EKVTDYYYYKAANHGLLKHFTLSLHYSHKALRIFQNTGNILRILHVKIGLSANLIYINDF
ERAEVMLHTALNDAEMLKDNETKITALHNFGLLNRKKGRLQESLDYFSQSLKLKKKHTMG
YYGTLIEMVQVLLDLNEREIAINLLQENLKDFKDQESVKYTELMVLYLDATEDDKRLSDY
LIDRGLPMMKQYDRYKAASFSERLAVYFKEKGDLISSNHYLQLSNELLKKLIFNHIEPLQ
IKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctataggcaggatcatctactatcatcgaaaaaaacaaaataaaacacaagagcag
ctttgcaaggggatatgttcaaccactcatttaagtaagattgagaacagttctaaagaa
gggaatctggaaacattagaattactttgtaagcgacttggtgtatcaatcgaagaggaa
acggcaaagacactttacttgaaacgccagctagcccaattctatgaagcgattgagaga
cttcatcgagatcatgccgaaagactgtaccaggagttacaaagaaataaagactatatc
caatgtacggaaatggtttacttatttgagctttacatgcttcgatatcaattattcacg
aacaatccaaccgaatatgaacaggcttctcttggactcaaaaagaatatgagtaaattt
tcatcgtttgaaaagtatttatgggagttctttcagggaatttattacggacagaaacag
caatactccaaggcgctttccatctttgatcaaatagaggatagagccgatctctatagt
gagaaagtaacagattattattattataaagcggctaatcatgggttattgaagcatttt
acattgtctctgcattactcacacaaggcattgaggatttttcagaacactgggaacatt
ttgaggatactccatgtaaaaatcggattatcggctaacttgatttatattaacgatttt
gaacgtgcagaagtcatgttgcatacggccttaaacgatgcagagatgttaaaggataac
gaaacgaaaattaccgcccttcataatttcggattgctaaatagaaaaaaaggaaggctg
caagagtcgttagactatttctcccagtccctcaaattgaaaaaaaagcatacaatgggg
tattacggcacattgattgaaatggtacaagtgttgctggacttgaacgagagggaaata
gcaatcaatcttttgcaggagaacctaaaagattttaaagatcaagagtccgttaaatat
acggagttgatggtgttgtatttagatgcgacagaggatgataaacggcttagcgactat
ttaatcgatcgtggtctgccaatgatgaagcaatatgatcgttataaggccgcgtcattt
tcagaacgactagcggtttattttaaagagaagggggacctgatttcttccaatcactat
cttcaattatcgaatgagctattgaaaaagttaatctttaaccatattgaacctcttcaa
ataaaaaagtaa
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