Rossellomorea aquimaris: U9J35_20370
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Entry
U9J35_20370 CDS
T09670
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
raz
Rossellomorea aquimaris
Pathway
raz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
raz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J35_20370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
raz03000
]
U9J35_20370
Transcription factors [BR:
raz03000
]
Prokaryotic type
Helix-turn-helix
Other families
U9J35_20370
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
RapH_N
HTH_31
TPR_12
TPR_2
TPR_1
TPR_10
TPR_8
Motif
Other DBs
NCBI-ProteinID:
WRP06207
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Position
4027899..4029131
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AA seq
410 aa
AA seq
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MHTGEIIRFYREKAGLTQSQLGEGICTTTHVSKIERGKTAYSDDIISLFSERLGIDIHHE
ITTFHQVEKQLQLWHNSIIMRRMNLVEQMKSELEKSPFLESSKYGVYYHLLRARYYLLHN
KDDLSSNILDSIHRGSSPLTAYETNLFLHVQGLIYIRDNTDENQQKALQVLKKIDMDTYK
NEECYYHISIAYHCIGNKVMSYFYAGKALSFFKKTNNYTGAIKAETLMLLQLSSEMYLEF
EDLVERYKSLIQDTDSLGYSDQKGALLNNLGYEYYNREEYALAKKCFKEALNLAEKGSIP
YLRRLCNFTDACIEGNLANSKQIKKHIQHGLSESKSANSTQFTILFELFSLHMDNKSDDY
FSYLESKALPYFFETKNVLLIERFGKVLYEYYVESEEFKKAVQLSNLLMR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaggggaaatcattcgattttatagggagaaagcaggtctcacccagtctcaa
ttgggggaagggatatgtacaacgacgcatgtcagtaagatcgagaggggtaaaacagct
tattcagatgatattatctcactcttttcagagcgtcttggaatcgatattcatcacgaa
atcaccacttttcaccaagtcgaaaagcaacttcagctctggcataatagcatcatcatg
aggaggatgaatctcgtggaacaaatgaaatccgaacttgaaaagtctccgtttctcgag
tcctcgaaatatggagtctattatcacttacttagggcgaggtactacctcctgcataat
aaagatgacctctcttcaaacattctggattccatccataggggttcaagccctctcaca
gcctatgagacaaatctgtttcttcacgttcaaggactgatctatataagagacaacacg
gatgaaaaccagcaaaaagcgttgcaagtcttaaagaagatagatatggatacatataaa
aatgaagaatgctattatcatatatcaattgcttatcactgtattggaaataaagtgatg
tcctacttttatgccggtaaagccctcagtttttttaaaaagacgaataattacaccggt
gcaatcaaggctgagaccttaatgctccttcagttgagcagtgagatgtatctcgaattc
gaggatctggtggaaagatataagagcctgattcaggacaccgattcacttgggtattca
gatcaaaaaggggctctcctaaataacttggggtatgagtattacaatcgtgaagaatat
gcccttgccaaaaaatgctttaaagaagcgctgaacctggcggaaaaagggtcaatacct
tatttgcggcgattatgtaactttacagatgcttgcattgaaggaaatctcgcaaattca
aaacagataaagaaacacatccaacacggtctatctgaaagcaaaagcgcaaacagcacc
caattcactatcttatttgaacttttttctctccatatggacaataagagcgatgactac
ttttcctatctcgaaagcaaagcactgccctatttttttgaaacaaagaatgtgctgttg
attgaaaggttcgggaaggtgctctatgaatattacgtagaatccgaggagtttaaaaaa
gcggttcaattatcgaatctattaatgagataa
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