Rhodopirellula baltica: RB12626
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Entry
RB12626 CDS
T00134
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RB12626 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rba03021
]
RB12626 (rpoA)
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB12626 (rpoA)
Enzymes [BR:
rba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RB12626 (rpoA)
Transcription machinery [BR:
rba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RB12626 (rpoA)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RB12626 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
CAD77689
UniProt:
Q7UIC5
LinkDB
All DBs
Position
6797797..6798792
Genome browser
AA seq
331 aa
AA seq
DB search
MTMHIRWRGMELPSSLEVDRDSLTQTYGKFSAEPFERGFGASIGNSMRRVLLSSLVGSAV
TQIKIRGAQHEFTTIPGVLEDVTDIVLNVKSLIVNSNTDSTRVITVERNTAGVVTGADVQ
TDADVEIINKDHVICTLTDDVPFMMEMVVETGRGYVPSTEHSSVDHEIGIIPIDAVFSPI
VRVRYEVEATRVGQKTNYDRLNLEIWTDGTINPEMALTEAAKILRKHLNPFVQYRELGPS
IFSAARGGAGSPEAQLEAKLNMTLADLRLSVRANNCLESENIMTVRDLVQRTEDSLLEVR
NFGDTTLNEVREKLSQYGLHLGMRVPNQPLF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcacatccgctggcgcggcatggaactgcccagttcgcttgaagtcgatcgt
gactcgctgacccaaacctacggcaaattttctgccgagccattcgagcgtggttttggt
gccagcattggtaacagcatgcgtcgcgtgctgttgagcagtttggtgggtagtgccgtt
acccaaatcaaaatccgtggcgctcagcacgagttcacgacgattccaggtgttctcgaa
gatgtcaccgacatcgtcctgaacgtgaagtcgttgatcgtcaacagcaacactgactcg
actcgcgtgatcactgtcgaacgcaacaccgctggtgttgtgaccggtgctgatgtgcaa
accgacgcggacgttgagatcatcaacaaagatcacgtgatctgcacgctaaccgatgac
gttccattcatgatggaaatggttgtcgaaaccggtcgtggatacgttccaagcaccgaa
cacagcagtgttgaccacgagatcggaatcatcccgatcgatgcggtcttcagccccatc
gttcgtgttcgttacgaagtcgaagcgactcgtgtcggtcaaaagaccaactacgatcgt
ttgaacctcgaaatctggaccgacggaacgatcaaccccgaaatggcgttgaccgaagcg
gccaagattctccgtaaacacctcaacccattcgtgcagtatcgcgaattgggaccaagc
atattctccgccgcccgcggtggagctggttcgcccgaagctcagctcgaagcaaagctg
aacatgactcttgcggatctgcgattgtccgttcgagcgaacaattgcttggaaagcgaa
aacatcatgacggttcgcgaccttgtgcagcgaaccgaagattcattgttggaagttcgc
aactttggcgacacaactctcaacgaagttcgtgaaaagctatcgcagtacggattgcac
ctcggcatgcgagtgccgaatcaacccctgttctag
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