Rhodopirellula baltica: RB12799
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Entry
RB12799 CDS
T00134
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03030
DNA replication
rba03410
Base excision repair
rba03420
Nucleotide excision repair
rba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB12799 (polA)
03410 Base excision repair
RB12799 (polA)
03420 Nucleotide excision repair
RB12799 (polA)
03440 Homologous recombination
RB12799 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rba03032
]
RB12799 (polA)
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB12799 (polA)
Enzymes [BR:
rba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB12799 (polA)
DNA replication proteins [BR:
rba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RB12799 (polA)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RB12799 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RB12799 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
PPS_PS
HHH_5
K1-lyase_Rider
Motif
Other DBs
NCBI-ProteinID:
CAD77785
UniProt:
Q7UI29
LinkDB
All DBs
Position
complement(6905179..6908262)
Genome browser
AA seq
1027 aa
AA seq
DB search
MTSSVPTTPDAAESQPAAQTPAKERDPDKLSATRGFTPSPNAATVPSVAGTGVTPLPTSS
AQQPRESSASEAAPKDATQSGPRADRETTEERKQRHDAVRIADDALPAVLQKPIPEPTDD
PIPDLTDKLVVVVDAHSLIYQVFHALPPMTSTGGLPVSAVYGFVGDMLELLSRKNPDYLI
AAFDKSEVTFRNELYPEYKANRDSMPDELRQQIPLIRQAIDAMGIGIIEQSGFEADDLLA
TVAAKVEEAGGRCLVVTSDKDCRQLISDQTKIYNIRKDQEIDAAELFGLWGIRPDQVVDY
QALVGDPVDNVPGISLIGPKIAQQLLETHDTLEEILNNAESISGKKRKENLMNGREAAMM
SRELVELKRDVESPIPWNRCVRSAADLERVDALLQEFGFRRLRSRAAELLGGEAPVEEPK
PAWESRYQTITNESELKALAVELAKQTVLAIDTETTSTHARGCDLVGISIAWQPGEAAYI
PVRAPDGDPAINELIVIEILRDVLESSAIEKVGHNLKFDVIVLRSAGVQLGGITMDTMVA
DYLLNSGGRNHGLDDLAQRRLDHTNLSIKDLIGTGKKQITMDQVPVDDVSPYACEDVDVP
IRLAPTLRDELNESGLDGLFDEVEMPLTEVLAEMEFNGIHVNADTLAKMSERFDKDIADL
RALVFSAAGHEFNLDSPKQLGVVLFEELGLPVIKKTKTGVSTDADVLSQLAVNHEIAEHV
LQYRQATKLKNTYIDALPQLICDKTGRVHTSFRQDVAATGRLSSSEPNLQNIPIRTEQGK
AIRAAFTAGREGWSLLGADYSQIELRVLAHYSGDEALIGAYHDDADIHTRVAAEVNGIEE
SEVTSDLRRIAKTINFGIVYGQSPFGLAKTLGISNDEARDYIELYFQRYSGVEAFMMDTL
ARCRNEGYVATMLGRRREIKGVRDLAKLPESKRRSLTEPERIAINMPIQGTAADLIKLAM
LRVHEQLKQSDLQARLLLQIHDELLLESPDEELDALSDTIREAMTSVMELDVPLKVDVAH
GRTWADC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
gtgacatcgtctgttccgaccactcccgacgccgctgaatcccagcccgccgctcaaacg
cccgcgaaagaacgcgatccagacaaactgtccgccacgcgaggattcacccccagcccc
aacgcagccaccgtcccatcggtcgctggcaccggagtgacgccactgccaaccagctcc
gctcaacaaccgcgcgagtcatcggcatccgaagccgcccccaaagacgccactcaatcc
ggcccacgagccgatcgcgaaacgaccgaagaacgcaagcagcgacacgacgcggtccgc
atcgcggacgacgccttgcccgccgtgctgcagaagcccatcccggaacccaccgacgat
cctattccagacctgactgacaaattggtcgtcgtcgttgacgctcactcgttgatctac
caagtctttcacgcgttgccgccaatgaccagcaccggtggactgcctgtgtcggccgtc
tacgggttcgtcggcgacatgctggaattgctttctcgaaagaacccggactacttgatc
gctgcgttcgacaaaagcgaagtcacgttccgcaacgagctgtatcccgaatacaaagcc
aaccgggactcgatgcccgacgaactccgccaacaaatcccgctgatccgccaagccatc
gacgcgatgggaatcggcatcatcgagcaatctggcttcgaagccgacgacctgctcgcc
accgtcgccgcgaaagtcgaagaggccggcggccgatgcttggtcgtgaccagtgacaaa
gattgccggcaactgatcagcgaccaaaccaagatctacaacatccgcaaagatcaagag
atcgacgccgcggaactgttcgggttgtggggcatccggcccgaccaagtcgtcgactat
caggccctcgtcggtgacccagtcgacaacgtccccggcatctcattgatcggccccaag
atcgcccagcaattgctcgaaacccacgacacgctggaagagatcctcaacaacgccgaa
tcgatctcgggaaagaaacgcaaagagaacctgatgaacggccgcgaagccgcgatgatg
tcgcgcgagttggtcgaactcaaacgcgatgtcgaatccccgatcccttggaaccgatgc
gttcgctcggcagccgatctcgaacgagtcgacgcgttgttgcaagagtttggctttcgc
cgattgcgaagccgcgccgcggaattgctgggcggcgaagcacccgtcgaagaacccaaa
ccggcttgggaatctcgctaccaaacgatcaccaacgaaagcgaactgaaagcactcgcg
gttgaactcgccaaacaaaccgtcctggccatcgacaccgaaacaaccagcacccacgcg
cgcggatgcgatttggtcggcatctccatcgcatggcaaccaggcgaagccgcctacatc
cccgttcgtgcacccgatggtgacccggcgatcaacgaactcatcgtcatcgaaatcctt
cgcgatgttctggaatcatccgcgatcgaaaaagtcgggcacaacctgaagttcgacgtc
atcgtcttgcgatcggccggcgttcagctcggcggcatcacgatggacaccatggtcgcc
gactacttgctcaattccggaggccgcaaccatgggctggatgatctcgcccaacgcaga
ctcgaccacaccaacctgtcgatcaaagacttgatcggaacgggcaagaaacaaatcacg
atggaccaagtccccgtcgacgacgtttcgccctacgcctgcgaagacgtcgatgtgccc
attcggcttgcaccgacgcttcgcgatgaactcaacgaatccggtttggatggattgttc
gatgaagttgaaatgccgctcaccgaagtgctcgccgaaatggaattcaacggcatccac
gtcaacgccgacacgttggcaaaaatgagcgagcggttcgacaaagacatcgcggacctg
cgagcgttggtgttttccgctgccggacacgagttcaacctggacagccctaagcaactc
ggtgtggtgctgttcgaagaactcgggctgccggtgatcaaaaaaaccaagacaggtgtc
agcaccgatgcggatgttttgagccaattggctgtcaaccatgaaatcgccgagcacgtg
ctgcagtatcgccaagccaccaaactgaagaacacctacatcgacgcgctgccgcaattg
atctgcgacaaaaccggacgtgtccacacgtcgttccggcaagacgtcgcggcaacggga
cgcctcagcagcagtgaacccaacctgcaaaacatccccatccgaaccgaacaaggcaaa
gcgatccgggccgcgttcacagctggtcgcgaggggtggtccttgctcggtgccgactac
tcacaaatcgaactgcgtgtgctggcccactacagcggtgacgaagccctgatcggtgcc
tatcacgacgacgccgacatccacacgcgagtcgctgcggaagtcaacggaatcgaagaa
tccgaagtcaccagcgatctgcgacggatcgccaagacgatcaactttggaattgtgtat
ggtcagagcccgtttggattggccaagacgctcggcatcagcaacgacgaagcccgcgat
tacatcgagttgtacttccagcgatactcgggcgtcgaagcgttcatgatggacacgttg
gcccgctgccgtaatgaaggctacgtggcaaccatgttgggtcgccgtcgtgagatcaag
ggtgttcgagacctcgccaagcttcccgaatcgaaacgccgcagcctcacggaaccggag
cgcattgcgatcaacatgcccatccaaggcaccgccgccgacttgatcaagctcgccatg
ttgcgagtccacgagcaactcaagcaaagcgatttgcaagcacgtctacttttacagatc
cacgatgaactgttgcttgagtcacccgacgaagaactcgatgctttgtccgacacgatt
cgcgaagccatgaccagcgtcatggaactcgacgtgcccctgaaagtcgacgtcgcccac
ggacgaacctgggccgattgctag
DBGET
integrated database retrieval system
