Rhodopirellula baltica: RB12825
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Entry
RB12825 CDS
T00134
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rba
Rhodopirellula baltica
Pathway
rba02024
Quorum sensing
rba03060
Protein export
rba03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RB12825 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RB12825 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB12825 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rba02044
]
RB12825 (ffh)
Enzymes [BR:
rba01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RB12825 (ffh)
Secretion system [BR:
rba02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RB12825 (ffh)
Eukaryotic Sec-SRP protein
RB12825 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_18
AAA_30
AAA_16
AAA_33
AAA_17
ATP_bind_1
APS_kinase
Thymidylate_kin
Zeta_toxin
AAA_31
MobB
AAA_19
ABC_tran
TctA
6PF2K
KTI12
NPHP3_N
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CAD77804
UniProt:
Q7UI11
LinkDB
All DBs
Position
complement(6917834..6919309)
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AA seq
491 aa
AA seq
DB search
MFDSLSDGLQSAFKSLSGKGKLTEGNMRDGLKIVEQSLLEADVSYSVVKDFMGHVSEKAL
GKRVLLSLRPQEELVRIVYDELVETLGPVDSALNLKADGPTIIMLCGLQGSGKTTTCGKL
TKLLQEQNITPLLVAADLQRPAAIEQLKVIGSQLGVPVHAETDHKDPVKVCQAGVEMARR
DGNRVVILDTAGRLAIDAELMAELKKIDRKVGPDQVYLVVDGMTGQDAVNSAGAFNDALE
LDGVVMTKLDGDARGGALLSVKQVTGVPIKFMGTGEHFDALEPFRPEGMASRILQMGDMV
AAAREAHRIVDEQEREELEAKMASGEFSLDDFKNMMQKVAQPGLMGRMMGLMPGMGQFKE
AMESEAAGGQLRQIIGAINSMTPAERKNPKLIDATRRTRIAKGAGVQSPVITQLIKQFDV
MKPMMQAMSGKGSGDRMAMMRQIQANAMSGDPRLGGLKTKQSTGKRLSPAEKAQQKKERE
KLKRKLKRKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgattctctctccgacggtctgcaatccgctttcaaaagtttgtctggcaaaggc
aaactgaccgaaggcaatatgcgcgatggtctgaagatcgtggagcaatcgctgctcgaa
gccgacgtcagctacagcgtcgtcaaagactttatggggcatgtttccgagaaagccctc
gggaaacgcgttcttttgtcgcttcggccacaggaagaactggttcggattgtctacgac
gagctggtggaaacgcttggcccagtcgattccgctttgaatctcaaagccgatggtccc
acgatcatcatgctgtgtgggttgcaaggtagcgggaaaacgacgacctgcggcaagctg
accaagctgctgcaagaacaaaacatcaccccccttctcgtcgcggctgacttgcaacgc
cccgccgccatcgagcaactcaaagtgatcggttcgcaactcggcgtcccggtccacgct
gaaaccgaccacaaagaccccgtcaaagtttgccaagccggcgtcgagatggctcgtcgt
gacggcaaccgcgtcgtgattctggatacggccgggcgtttggcgatcgacgctgagttg
atggccgagctgaagaagatcgaccgcaaagtcggccctgaccaggtttacctcgtggtc
gacggcatgactggccaagacgcggtcaacagtgcgggtgcgttcaacgacgccctggaa
ctggacggcgtcgtcatgaccaagctggacggtgacgctcgtggcggagcattgctgtcg
gtcaaacaggtgaccggcgtcccgatcaagttcatgggaacgggtgagcactttgatgct
ctggaacccttccgccctgaaggaatggccagccgcatcctgcagatgggcgacatggtc
gctgcggctcgcgaagcccaccgaatcgtcgacgaacaagaacgagaagagctggaggcc
aaaatggccagcggcgaattctcgctcgacgatttcaaaaacatgatgcagaaagtcgcc
cagcctgggttgatgggacgcatgatggggctgatgcctggcatgggtcaattcaaagaa
gcgatggaatcggaagcggccggcggccaactccgacaaatcatcggggcgatcaattca
atgacccccgccgaacgcaaaaaccctaagctgatcgatgcgacccgtcgcacccgaatt
gccaagggtgcaggcgttcaatcgccggtgatcacgcaattgatcaaacaattcgacgtg
atgaagccgatgatgcaagccatgtccggaaagggcagtggcgatcggatggcgatgatg
cgtcaaattcaggccaacgcgatgtcgggcgacccccgcctgggcggcttgaaaacaaaa
caaagcacgggaaaacgactttccccggccgaaaaggcccagcaaaaaaaagaacgcgaa
aagctaaaacgaaaactcaaacgtaaaaaacgctga
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