Rhodopirellula baltica: RB13225
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Entry
RB13225 CDS
T00134
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB13225 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB13225 (recQ)
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB13225 (recQ)
Enzymes [BR:
rba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB13225 (recQ)
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RB13225 (recQ)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RB13225 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DIP2311-like_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CAD78011
UniProt:
Q7UHG1
LinkDB
All DBs
Position
7096300..7097982
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AA seq
560 aa
AA seq
DB search
MCVVVLCDCRAILLVAVLPLPSTLCRKVSGRNRRRCGSAKEKDGPLPLGWHELCDAGPSR
AARRRSNRRPPHDCSTMDLLAHLDRCFGFQSFRHGQREACESIVAGKDTIVLMPTGAGKS
LCYQLPGILRDGVTLVVSPLISLAKDQAEHLKKAGQPTVVLNSTRTKKQIESARSKIAAG
KVKFVLTTPERLQKTDICELLAGVGVGLMVVDEAHCVSQWGHDFRPDYLCLPSIRERLGN
PPLAALTATASERTLDEVRCSLRLNDPTIVRTGIDRPNLRIEVVRCYSAEDKLKQLHRAL
EIEGMLERTEPAIVYCGTTKTADQLAKSFGGLCYHGKMRKADRAAAQEEFMNGRPSVMFA
TNAFGLGIDKHDLRQVIHVELPGSLESYYQEMGRAGRDGKRSRCTLLYDPSDVDLRKMFA
GGMMAASKIMTAHHTLVRGVHELGEDGEVALSKLAPISPLGRVTLKNCFQLLSSRGIVAP
AGRGRWRLIADELEHRVADRLEEATRVRSEDRQVALREMVEFAESSKCRWELLREHFGVS
ETTSSDCLCDQCGAAVVASA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
ttgtgcgttgtggttttgtgcgattgccgtgcgattcttctcgtcgcagttctaccgctg
ccgtcaacgctctgcagaaaggttagcgggaggaacaggcggcggtgcggttcagccaaa
gaaaaggacggtccgctgccgctgggttggcacgagctttgcgatgctggcccatcacgt
gccgctcgtcggcgttcaaatcgccgcccgccgcacgactgttctacgatggatctactc
gctcacctggaccgttgcttcgggttccaatcctttcgtcacggtcaacgcgaggcatgc
gagtcgatcgtggctggcaaagacacgatcgtgttgatgccaaccggggccggtaagagc
ctgtgctatcagctgcctggcatcctccgtgatggagtgacattggtcgtcagcccgttg
atttcgcttgccaaagatcaagcggaacatctgaagaaggctggtcagccaaccgtggtg
ctcaacagcacgcgtacaaagaagcaaattgagtccgcgcggtcgaagattgccgcggga
aaggtcaagttcgttctcacgacacccgaacgattgcagaaaactgatatctgcgaattg
ctggccggtgtgggagtcgggttgatggtcgtcgatgaggctcactgcgttagccaatgg
gggcacgattttcgcccggattatttgtgcctgccatccattcgcgaacgtttggggaat
ccgccgttggctgctctcaccgcaaccgcatcggaacgaaccttggatgaagtccgatgc
tcgctgcgtttgaatgatccaaccattgtgcgaactggaatcgaccgacccaatctccgg
atcgaagttgttcgttgctattcggcggaagacaaactgaaacagttgcaccgggctctc
gagatcgaaggcatgctggaacgcaccgagccggcgattgtttattgcggaacgaccaag
acggctgaccagttggcgaagtccttcggtgggttgtgctaccacggcaaaatgcgaaag
gccgatcgagccgccgctcaagaagagttcatgaacggccgtccgagcgtgatgtttgcg
accaatgcgtttgggttgggcatcgacaaacatgacctccgacaagttatccatgttgag
ttgcctggatcgttggagtcgtactaccaagagatgggacgagccgggcgagacggcaag
cgatcgcgttgcacactgctgtacgatccgtccgatgtggacctgcggaagatgtttgcg
ggcgggatgatggctgcgagcaagatcatgacggcgcatcacacgttggttcgcggggtt
cacgagttgggcgaagatggcgaggtggctttgtcgaagctggcaccgatcagtccgctc
ggccgggtcacgttgaagaactgttttcagttgttgtcgtctcgcggcatcgttgcacca
gccggacgcgggcgatggcgtttgattgcggacgagctcgagcaccgtgtcgcggatcgg
ttggaggaagcgactcgagtgagatcggaggatcgtcaggtggcgttgcgcgagatggtg
gagtttgccgagtcatcgaagtgtcgttgggagttgctccgtgagcactttggcgtcagc
gaaacgacgagctcggattgtctgtgtgaccagtgtggagccgccgtggtcgcgagtgcg
tga
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