Rhodopirellula baltica: RB13271
Help
Entry
RB13271 CDS
T00134
Symbol
ddlA
Name
(GenBank) probable D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rba
Rhodopirellula baltica
Pathway
rba00470
D-Amino acid metabolism
rba00550
Peptidoglycan biosynthesis
rba01100
Metabolic pathways
rba01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB13271 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RB13271 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RB13271 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rba01011
]
RB13271 (ddlA)
Enzymes [BR:
rba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RB13271 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rba01011
]
Precursor biosynthesis
Amino acid ligase
RB13271 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
ATPgrasp_ST
ATP-grasp
GARS_A
RimK
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
CAD78035
UniProt:
Q7UHD8
LinkDB
All DBs
Position
complement(7117533..7118558)
Genome browser
AA seq
341 aa
AA seq
DB search
MSKLRVLVLVREGNVPPDTLEGFTDKESDPWKAEYDVCETLRGLGHEVLPLGIFDDLAPI
RAALQNFQPNITYMLLEEFYGVVTYDFAVISYLELMQQPYSGCNPRGLMLSKDKALSKKL
LMYHRIATPRFAVFPNGRAVRRPKKLEFPLFVKSTIEDASFGIAQASIVHNDEALAERVT
FLHEKTGGDVIVEQYIEGRELYVGVMGNTRLVTFPAWEMDFGKMPDESARIATSRVKWDR
KYQEKHDITCHAAEGLTEVQQKHIAKLCKRVYRALHMSGYARMDLRMTATGEVYVIEANA
NPNIEYGEDFAESAEAAGIPYESLIQRILNLGLSYRAAWMG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattgcgtgtgctggttttggtccgagaaggcaacgttccaccggataccctg
gaaggattcaccgacaaagaatctgacccgtggaaggcggaatatgatgtctgtgaaacc
cttcgcggactcgggcatgaggttctaccgctggggatctttgatgacctggctcccatt
cgtgcggccctgcagaactttcaacccaacatcacctacatgttgctggaagagttctac
ggtgtggtcacctacgatttcgcggtgatcagctatctcgaattgatgcagcaaccctac
agcggatgcaacccgcggggattgatgctcagcaaagacaaggcgttgtcgaaaaaactg
ctgatgtatcaccgaatcgccacgccgcgtttcgcagtttttccgaatggccgcgcggtg
cgtcgtccgaaaaaactcgaattcccgttgtttgtcaaatcaaccatcgaggacgcttcg
ttcggtatcgctcaagcctcgatcgttcacaacgacgaagcactcgccgaacgagtcacc
ttcttgcacgagaagacgggcggcgacgtgattgtcgagcaatacatcgagggtcgcgaa
ttgtatgtcggcgtgatgggcaacactcgattggtgacctttcccgcttgggaaatggac
tttggcaaaatgcccgatgagtcggctcgaatcgcgaccagccgagtcaaatgggaccgc
aaataccaagaaaaacacgacatcacctgtcatgccgccgaaggtttgaccgaggtccag
caaaagcacatcgccaagctttgcaaacgggtgtaccgagcgcttcacatgagtggctac
gctcgcatggatttgcggatgactgccacgggcgaagtttacgtgatcgaagccaatgcg
aaccccaacatcgaatacggggaagacttcgctgaatctgccgaagccgccgggattccc
tacgaatcgttgattcaacgcattctcaaccttggattgagctaccgagccgcttggatg
gggtga
DBGET
integrated database retrieval system
