Rhodopirellula baltica: RB1538
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Entry
RB1538 CDS
T00134
Symbol
lysA
Name
(GenBank) hypothetical 49.9 kDa protein Y4YA-putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rba
Rhodopirellula baltica
Pathway
rba00300
Lysine biosynthesis
rba00470
D-Amino acid metabolism
rba01100
Metabolic pathways
rba01110
Biosynthesis of secondary metabolites
rba01120
Microbial metabolism in diverse environments
rba01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB1538 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB1538 (lysA)
Enzymes [BR:
rba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RB1538 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAD72149
UniProt:
Q7TTP9
LinkDB
All DBs
Position
complement(788614..790083)
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AA seq
489 aa
AA seq
DB search
MNHSPLPCRPETSHPVSATDHAVQLRSRCRGCIPLDAVWSPWMTELAADSDRVKQLIEFH
GSPVNVLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEFVRTGLMESIGFDVASE
FEKQQTLDELYRLPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVLVIDNEDELTTLRETLA
HLGSTAPKARIAFRLQHCSAKFPDLPSRFGMPANELTLLARSLCDEPRIQVVGIHFHVHR
SDEQFSPSFTKALIDDALDVVDRVREIGHAVAWLDIGGGFPVNYLCHQKHWQRFLKEAHT
FTESSGRFEANRKLTWNQRPLKDIDPTWQPMNAADWLRAVLTSSLAYEINRRELILKCEP
GRALLDGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTTRDDFLVDPIVISASNESAKP
TNQTDHAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDFVLIPNTAAYQMHFAESRAHQ
MPLAENVFL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacagcccccttccgtgtcgccccgaaacatcccatccagtttctgccaccgac
cacgcggtccagctccgcagccggtgccgagggtgcattccgctggatgcagtttggtca
ccgtggatgacggagttggctgccgactccgaccgcgtcaaacagctgattgagtttcac
ggctcgccggtcaacgtgttgtcgaccgatcccatgcggtccaacatcaaagaccttcag
aacgtcgccagccaagcaagtgtgccgctgcaaattcacttcgctcgcaaagccaacaag
tgtgccgaattcgtccgcaccggactgatggaatccatcggcttcgatgtcgccagcgaa
ttcgaaaagcagcaaacgctggatgaactgtatcgattgccgcaacatccgttcgattcc
cctatcgtctgcaccgctgcagtcaaaccggtcagcttgattcgttcgtgcgtgttgagc
aacatcgttctcgtcatcgacaacgaagatgaactcacaaccttgcgtgaaaccctcgct
cacctgggatcgaccgcaccgaaagcaagaatcgcgttccgtctgcagcattgttccgcc
aagttccctgacttgccatcgcggttcggaatgccagccaacgaattgactctgcttgcg
agatcactttgcgacgaacctcgcattcaggtagtcggcattcactttcacgtccaccgg
tctgacgagcaattctcgccatcattcacgaaagcgttgatcgacgatgcacttgatgtc
gtcgatcgagttcgagagatcggacatgcggtcgcatggttggacatcggcggcggcttt
ccagtcaattatctctgccatcaaaagcactggcaacgttttctcaaagaagcccacacg
ttcacggaatcaagcggtcgtttcgaagcgaatcgaaaactgacgtggaatcaacgtcct
ctgaaagacatcgatccgacgtggcaaccgatgaatgcggcggattggcttcgcgccgta
ttgacttcatcgctcgcctacgaaatcaatcgtcgagaactgattctaaaatgcgaacct
ggccgagcactgctggatggctgcggcttgacgatcgcggaggttttgttcgtcaaacgt
gaccaaaatcaaaaccatctgatcgggctgatgatgaacagctcgcagtgccgaacaact
cgcgatgatttcctggtcgatcccatcgtcatctccgcttcgaatgaatccgccaagcca
acaaaccagactgatcatgcggagatcgaaggctactttgtcggtggttactgcaccgag
tcagagtatctgatgcagcgacgatttcggtttccacgcggtatttcacgaggtgatttt
gtgctgatccccaacaccgccgcctaccagatgcatttcgctgaaagcagggcacatcaa
atgccgttggccgaaaacgtctttctctga
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