Rhodopirellula baltica: RB1964
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Entry
RB1964 CDS
T00134
Symbol
rpoA
Name
(GenBank) probable DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RB1964 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rba03021
]
RB1964 (rpoA)
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB1964 (rpoA)
Enzymes [BR:
rba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RB1964 (rpoA)
Transcription machinery [BR:
rba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RB1964 (rpoA)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RB1964 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
TPR_2
TPR_1
TPR_19
TPR_14
TPR_6
TPR_12
TPR_16
TPR_7
ANAPC3
TPR_8
TPR_11
TPR_17
TPR_10
MIT
TPR_5
HAT_PRP39_C
Coatomer_E
TPR_CcmH_CycH
SAM_EPH
ARM_TT21_N
PknG_TPR
Motif
Other DBs
NCBI-ProteinID:
CAD72353
UniProt:
Q7UWL0
LinkDB
All DBs
Position
1034475..1035977
Genome browser
AA seq
500 aa
AA seq
DB search
MPPSVGKNWHHNLCVDFLDKFLFLQSTFLQSRSPPDSLSLLSDRCASEPKLAPDKTKMSE
VELEVLDLKQMVLASNSFGPSDVAEIRQAITENYGHFGELRDAVNEMEQDDALTPAGKTK
MGVCQFMLGRFKDASETLSAADGSAMALFYNARCQFELSNFDGAIEGYEQAKTSGYNEDQ
CKIGIAEAKRYQGKIEEAMAILDDIFGPAEQTADYMYQRAATAAQIGGRMEEAINLYQRA
VSTDENHAGALFGLALENDRLGNDDEALRLYERAAKAFPTGIGALINLGVMYEDNGQYDK
AQLCYKRILDCHPDHPRTQLYMKDASATGNMLYDEEAQRRNDRLAQTLNMPVANFELSVR
SRNCLQKMGIETIGDLTRHSEQELLSSKNFGETSLVEIREMLSQKGLSLGQFAGEKKSND
PPVDTSHMSPDEQALLERPIADLNLSVRARKCMTRLQINSIGELIRKTGDDMLECKNFGV
TSLNEVREKLGDLGLKMRGD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgccgccgagcgtcgggaaaaattggcatcacaatttgtgcgtcgattttctcgacaaa
tttttgttcctgcagagcacatttttgcagagcagatcgccacctgactccttatccctc
ctttcggatcgctgtgcgagcgagccgaagttagccccggacaaaacgaagatgagcgaa
gtcgaactcgaagttctcgacctgaagcaaatggttctggcgagtaactcgttcggcccc
agcgacgtcgccgaaattcggcaggcgatcaccgaaaactacggacacttcggtgaactg
cgcgacgcggtcaacgaaatggagcaggacgacgccctgactcccgccggcaaaaccaaa
atgggtgtttgccaattcatgctgggccgtttcaaagacgcctcggagaccctctccgcg
gccgacggcagcgcaatggcgttgttctacaacgctcgttgccagtttgaactgtcgaac
ttcgacggggcgatcgaaggctacgaacaagccaagacgtcaggatacaacgaagatcaa
tgcaagattggtatcgcggaagccaagcgttaccaaggcaagatcgaagaagcgatggcg
atcttggacgacatcttcggccccgccgagcagaccgctgactacatgtatcagcgtgct
gcgaccgccgcccagatcggtggacggatggaagaagcgatcaacttgtaccaacgagct
gtgtcgaccgacgaaaaccacgctggtgcgttgtttggtttggcactcgaaaacgaccgc
ttgggcaacgacgacgaagccctccgtctgtacgagcgtgccgccaaggcattcccgacc
ggcatcggtgccctgatcaacttgggcgtgatgtacgaagacaacgggcaatacgacaag
gctcagctttgctacaagcgaatcctggactgtcaccccgatcaccctcgtacgcagctg
tacatgaaggacgcttcggcgaccggcaacatgctgtacgacgaagaggcccaacgtcgc
aacgatcgtttggctcaaacgttgaacatgcccgttgcaaacttcgagctcagcgttcga
agccgcaactgcctgcagaagatgggcatcgaaacgattggcgatttgacccgccacagc
gaacaagaattgctctcgagcaagaactttggcgaaaccagcttggtcgaaattcgcgaa
atgctgtcgcagaaaggtttgtcgctcggccagttcgctggcgagaagaaatccaacgac
ccgcctgtcgacacttcgcacatgtcgcccgacgaacaagcgttgctggaacgtcccatc
gcagacctcaacttgtccgttcgtgctcgcaagtgcatgacccgtttgcaaatcaactcc
attggcgagctgatccgcaagaccggcgatgacatgcttgagtgcaagaactttggtgtg
accagtttgaacgaagttcgtgaaaagctgggtgacctcggattgaaaatgcggggcgac
tga
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