Rhodopirellula baltica: RB2226
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Entry
RB2226 CDS
T00134
Name
(GenBank) probable vegetatible incompatibility protein HET-E-1
Organism
rba
Rhodopirellula baltica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSCyt2
PSD1
WD40
PSCyt1
ANAPC4_WD40
Big_2
Motif
Other DBs
NCBI-ProteinID:
CAD72498
UniProt:
Q7UW71
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All DBs
Position
1167675..1173032
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AA seq
1785 aa
AA seq
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MHLLGRKFVVIDISLVTLSKQSPRSPLPHLAVAGLFFLSALGAPPSSAANETDADNVSYH
DDVLPILRTNCFGCHQGAKQLGEYVMTDFDALIRGGESGDAAIVPGDADSSYLISLITSH
EGVAEMPKAPRKPLHETEVDTIRRWIEQGAKNDSPETSGPRFDADQPPVYAGPPTLPSID
LSPDEQTLAIAGYHEICLLDAKSGEMQTRLVGISPRINSVRFSPDGSRIAAAGGMPGELG
ELQIWNASTGKLELSRQITYDTITGLSWSPDGSKIAIGANDNTVRALDSATGEQVLFQGA
HEDWIRDTVFTPDGKHLVSVARDMTCKLTEVETERFIDNVTSITPGALSGGLSSVAMHPS
RDEIVVGGSDGVTKVYRVFRQTKRQIGDDANLVRNLPRLNGRIRQVVVNSAGTHLAAVAT
IDGHSELRVWKYDFTGELTDELKAILGKRVANRSADEKKKVDESVNQTTTQTVHFELPDA
AAYSLELTNDGSVFVAANDGQIRHLEATGKLVRSFHAVPQDESVSNEVLAATAPTLDFAD
AKLEPADEASDVQPESAVAPSDVVEISVVPKSISLTSPYDYVQLVAIGKRHDGSTIDVTR
QINVSKSDSYVSLPGGLIRPQSNSVGEVTVSFGSHQHTLPIEITGQSKFDVDFIRDVNPV
LSRLGCNQGTCHGAQKGKNGFRLSLRGYDPIFDIRALTDDLAARRINPSAPDDSMMLRKP
LGITPHEGGTLMKKGDPYHAVLHRWIADGSKLDLETPRVTSLEISPRNPVVQSTDARQQV
RIVATYANGEARDVTREAFISSGNTEVATAKTGGMLHAVRRGEAPVLARFEGAYAATTLT
VMGDRTGYEQAEVDTWGRIDELVAQKWDRMKIVPSDVADDATFLRRVHLDLTGLPPTSQT
VREFLADETPTKLKRQAVIDRLIGNEDFVEYWTNKWADLLQVNRKFLGVEGTKLYRDWIR
KAVEENRPYDEFAYQILTASGSNQTNPAASYYKVLRTPEDTMENTTHLFLGIRFNCNKCH
DHPFERWTQDQYYELAAYFAKVDRKKDPDSGNRKIGGTAVEGATPLFEIIADSADSEVQH
ARTGEDVVPSFPYELAGNVANESEQQTRIAPLDGQTLVSKSNDTPTRREELASWMTDPAN
PYFARSYVNRIWGYMTGVGLIEPIDDIRAGNPPTNPLLLDYLTDEFIGSNFDTRHLMRLI
VSSRTYQLSVESNQWNEDDHLNYSHATPRRLPAEVIFDAVHSLTGATSQIPGMPAGTRAA
AATDSGVALTDGFLANLGRPVRETACECERGTDLQLGPVMALISGPTIGTAISDPKNELE
KIVAENSTDEAVTEEIFLRALGRYPTDKERAAFATIHSQIAGDHETLVQRLADAEAAWTE
RFPKLEASRKEMLSKLANDIEARRVEIADERAKMEADRQKKIAEATQNLADQEAKLPELV
AAFLAEKKADTEWHPLTPISLSATNQATLAVQPDRSVLASGKQGNGSYIVDFETNLTGIT
GFRVEALTDPSLPQDGPGRAGNFVVTEITVRAGSDGAESDGTESDGTESDGTESDGTESD
GTESDGTGSDTKIQSKDLPTVKIARASADFLQNGFKIENTFDGNAGNQSAWAVSGANGHE
HWATFQFAKPIESKGKTRLRFELAQNHNAKDHQLGRFRISVTTDSGEIPLGLSETFAAAE
RTPADQRGEALSKTIDQYVSTINPDLKSARDALNQAKRPLPEDAQIVALQKRRKRFEAET
PIDPSLVELRANVERSKTQLGSVRLTAAEDLVWALVNSPAFLFNH
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcttggaaggaaattcgtcgtgatagatatttcgttggtcacgctgtccaaa
cagtcaccgcgatccccacttccccacttagccgttgcgggactcttctttctctctgcc
cttggtgctccaccgagttcggcagcgaatgaaaccgatgcggacaacgtcagttatcac
gacgacgtcttgccaatccttcgaaccaattgcttcgggtgccatcaaggcgccaagcaa
ttgggcgaatacgtcatgaccgactttgacgcgttgattcgcggcggcgaaagcggagat
gcggcaattgttcccggagatgccgattcgagctatttgatctccttgatcacgtcgcac
gagggcgttgccgaaatgcccaaggctcctcggaaacctttgcacgaaaccgaggtcgat
acgattcggcgatggatcgagcaaggtgcgaagaacgattcccctgaaacatccggcccg
cgattcgatgcggaccagccaccggtatacgccgggccgccgaccctgccatcgatcgat
ctatcgcccgatgagcaaacgctcgcaatcgcgggttaccacgagatttgtttgctagac
gcgaaatcaggcgaaatgcaaactcgtttggtgggtatttcgcctcgcatcaactccgtt
cgcttctcacctgatggatctcgcatcgcggccgctggtggcatgcccggcgaactgggt
gaactacagatttggaacgcatcgaccggcaagttagaactttcgcggcaaatcacctac
gacacgatcacgggtttatcgtggtcgcccgacggatccaaaatcgcgattggagccaac
gacaacacggtgcgagccttggactcagccaccggtgaacaagttttgttccaaggtgca
cacgaagattggattcgcgacacggtgttcacgccggacggcaagcacttggtttcggtc
gcgcgagacatgacttgcaagttgaccgaagtcgaaaccgaacgcttcattgacaatgtc
acgtccatcaccccgggcgctttatcgggcggattgtccagcgtcgcgatgcatccttct
cgcgatgaaatcgtggtgggcggatccgatggtgtgacgaaagtctatcgcgtctttcgt
caaacaaaacgacaaattggtgacgatgcaaacttggttcgcaatctacctcgattgaac
ggacgcatccgccaagttgtcgtgaactcagctgggacgcatctcgccgccgttgcaacg
atcgacgggcactctgaactgcgagtgtggaagtacgacttcaccggcgagttgaccgat
gaactcaaagccattctcggcaaacgcgttgcgaatcgctccgccgacgaaaagaaaaag
gtcgacgaatcggtcaaccaaacgaccacgcaaacggtgcatttcgaactgcctgacgcg
gccgcctattcgttggaattgaccaacgacgggagtgtctttgttgccgccaacgacgga
caaattcgacacctcgaagcgaccggaaagctggtgcggtcatttcacgccgttccgcaa
gatgaatcggtctcgaatgaagtactcgcggcaaccgcacccactttggatttcgcagac
gccaaactagaacccgccgatgaggcgagtgacgtgcaacctgagtcggcggtcgcaccc
tccgatgtcgtcgaaatatccgttgttccgaagtcgatttcgctgacttcgccgtacgac
tacgttcaactcgtcgccatcggaaaacgacatgatggatcgacaattgatgtaacgcgt
caaatcaatgtgtcaaaatcagactcgtatgtcagtctccccggtggtctgattcgtcct
caaagcaattccgtcggcgaagtcaccgtcagcttcggatcgcatcaacacacgctgccg
atcgagatcactggacaaagcaaattcgatgtcgatttcatccgtgatgtgaacccggtg
ttgtctcgtttgggatgcaatcaaggcacctgtcacggggctcagaaaggcaagaacggt
tttcgtttgtcgctgcgaggttatgaccccattttcgacattcgagccctgacggatgat
ttggccgcgcgacgcatcaatccgtctgctcccgatgattcgatgatgcttcgcaaaccg
ttgggcatcacgcctcacgagggcggcacgctgatgaagaagggcgatccttatcacgcg
gtcttgcatcgctggatcgctgatggttccaaacttgatttggaaacgccacgtgtcacc
tcacttgaaatttccccgcgcaaccccgtcgttcagtccaccgacgctcggcaacaggtc
cgtatcgttgcgacctatgccaacggcgaagctcgagatgtgacgcgggaagcgttcatc
agttcgggcaacaccgaagtcgcgaccgcaaaaaccggcgggatgctccacgctgttcgt
cgtggtgaagcacctgtgctggctcgttttgaaggcgcatacgccgctacgacgctgacc
gtgatgggtgatcgaacgggatacgaacaagccgaagtggacacatgggggcgtatcgat
gagttggtcgctcagaagtgggatcgaatgaaaatcgttcccagtgacgttgccgacgat
gccaccttcctacgccgcgtgcacttggacctgactgggttgcctccgaccagccaaacg
gtgcgagagtttttggcggatgaaacgccgaccaaactcaaacgccaagccgtgatcgat
cgactgatcggcaacgaggacttcgtcgaatactggacgaacaaatgggcggatctgttg
caggtcaaccgcaagtttctgggcgtcgaaggcacaaaactctatcgcgactggatccgc
aaagcggtcgaagaaaatcgtccgtacgacgagtttgcctatcagattctgacagcgtcg
gggtccaaccaaactaacccggccgcgtcgtattacaaagtcctccggacccccgaggac
acgatggaaaacacgacgcacctgttccttggcattcgcttcaattgcaacaagtgccac
gatcacccgttcgaacgctggacccaagaccagtactacgagctggcggcctacttcgcc
aaagttgatcggaagaaggatccagactctggcaatcgaaaaattggtggtacggcggtc
gaaggtgccacgccactgttcgagatcatcgctgactcggcagattccgaagttcaacac
gctcgaacgggcgaagacgttgtgccctcgtttccttacgagttggccggtaatgttgcg
aacgaatctgagcagcagacacgaattgctccattggatggacaaacgttggtctcaaaa
tccaacgacacacccacgcgacgtgaggaactcgcgagctggatgacggatccagccaat
ccgtacttcgcgcgttcttacgtcaatcgcatctggggatacatgaccggtgtcggtttg
atcgaaccgatcgatgacatccgcgccggtaacccgccaactaacccactgctgttggac
tacttgaccgacgagttcatcgggtcgaacttcgacacccggcatctaatgcgattgatc
gtcagttcgcgaacttatcagttgtccgttgagtccaatcaatggaacgaagacgatcat
ctgaactactcccacgcgacaccgcgacgtctgccagctgaagtgatcttcgacgcagtc
cactcgctcacgggagccaccagccaaattcccggcatgccggctgggacacgtgccgcc
gccgcaacggattcgggggtggctctgaccgacggtttcctcgcgaaccttggtcgtccc
gtccgagaaaccgcgtgtgaatgtgaacgaggcacggacctgcagctcggtccggtgatg
gcactgatcagtggtccgacgatcggcaccgcgatcagcgacccaaagaacgaactcgaa
aagatcgtcgcagaaaattccactgacgaggccgttacggaagagattttcttgcgagcc
ttgggccgctacccgaccgacaaagaacgagcggctttcgcgaccattcattcgcagatc
gctggcgaccacgaaacgctggttcagcgtttggcggatgcagaagccgcttggacggag
cgtttccctaagttggaagcgtcacgcaaagagatgctttcgaagctcgccaatgacatt
gaagctcgacgtgtggagatcgccgatgaacgagccaaaatggaggccgaccgtcaaaag
aagatcgccgaggcaactcagaaccttgctgatcaagaagcgaaattgcccgagttggtt
gctgcgtttttggcggagaaaaaggccgacacggaatggcatcctttgacaccgatctca
ttgtccgcgaccaaccaagcgacgttggccgttcagcccgatcgcagcgttttggcgagc
ggaaagcagggcaacggttcctacattgttgacttcgaaaccaacctgacgggcatcact
ggtttccgtgtggaagcactcactgacccgagcctgccacaagacggtccgggtcgcgcg
ggaaacttcgtggtcacggagattaccgttcgtgctggctcggacggggctgaatcggac
gggactgaatcggacgggactgaatcggacgggactgaatcggacgggactgaatcggac
gggactgaatcggacgggactggctcggacacgaagatccaatcgaaagatctgccaacc
gtcaagattgcccgagcctcagcggacttcttgcagaacggtttcaaaattgaaaacacg
ttcgacggaaatgccggcaaccaatcagcctgggccgtatccggagccaatggacacgag
cactgggcaaccttccaatttgcgaaaccaattgagagcaaagggaagacgcgtttgcgg
ttcgaactggctcagaaccacaatgcaaaagatcatcaattgggacggttccggatcagc
gtgaccacggattcgggcgaaatcccgttgggattgtcggagaccttcgccgccgcggaa
cgtaccccggccgaccaacgtggcgaagcattgtcaaaaacgatcgatcagtacgtttcc
acgatcaaccccgatttgaagtcggcccgtgacgcactgaaccaagccaaacgcccgctg
ccggaagacgcgcagattgtcgctctgcaaaagcgacgcaaacgctttgaggccgagaca
ccgatcgacccgtctttggtcgaactgcgagcaaacgtggaacggtccaagactcaattg
ggcagcgttcgcctgaccgcagcggaagacttggtctgggccctcgtcaactcgcccgcc
ttcttgttcaaccactga
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