Rhodopirellula baltica: RB2547
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Entry
RB2547 CDS
T00134
Name
(GenBank) hypothetical protein-signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rba
Rhodopirellula baltica
Pathway
rba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB2547
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rba02000
]
RB2547
Transporters [BR:
rba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RB2547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
fn3
Motif
Other DBs
NCBI-ProteinID:
CAD72704
UniProt:
Q7UVL8
LinkDB
All DBs
Position
1328986..1330332
Genome browser
AA seq
448 aa
AA seq
DB search
MISVYTAKRRAEICPRSMQPLSSMFAMRLNRREMIGASLASAAAVASSDVFAAPAIHNGE
KPVVRVLGTHVTLQEDLRVRAEADLGIRLEFSPGGSAEVLHRASTRPETFDLYEQWSNSI
RVLWQANAIQPIDRKRIRYWDEINPLTREGRLTPKAKRGAGDAPNKLLFIQPDGTLGGQP
TDHVTFLPYVHNVDSFGYDASIVPRGVPFETESWAWLLDERWAGRVAIVNEPTIGLFDLA
LAVQAKGLAEFEDIGNLSEADLETLFKILERYRQQGHFRGVWSSVPASVDLMSRGEAVIE
SMFSPAVFDLKGRGIDCVYASPKEGYRAWHGVMCLSSKTTGPVKDAAYEYMNWWLSGWPG
AFIARQGYYISNPQRSREELSEAEWDYWYQGKPAATDLLGTTGQVVVNQGQRRDGGSYVK
RFSNVAVWNTVMKSYEASLRHWNEFLAG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgatttctgtctacacggccaagcggagagcggagatttgtcctcgttcaatgcaacca
ctttcatcaatgttcgctatgagactcaatcgccgcgaaatgattggcgcaagcctggct
tccgcagccgcagttgccagttcagacgtctttgcggcaccggccattcacaacggagaa
aaaccggttgtgcgtgttctcgggacacacgtgactttgcaggaagacctacgggttcgc
gcggaggctgatctggggatcaggctggaattctcgccgggtggtagtgcggaggttctg
caccgagcgtcgacgcgtcccgagacgtttgatttgtatgagcagtggtccaacagtatc
cgcgtgctctggcaggcgaacgcgattcagccgatcgatcgaaaaaggattcggtactgg
gatgaaatcaatccgctgacccgcgaaggtcgtttgactcccaaagcgaaacgcggtgcc
ggcgatgcaccgaataagttgctgttcatccagcccgatggaacgttgggcggccaaccg
accgaccatgtgactttcctgccttacgtgcacaacgttgactcgtttggttacgacgcg
tcgatcgttccacgtggtgttccgttcgagactgaatcgtgggcttggttgctcgatgag
cgttgggccggtcgagtcgcaattgtcaacgaacccaccattggtctctttgatctggct
ctggccgttcaagccaagggtttggctgagttcgaagacattggcaatctcagcgaagcc
gacttggaaacgctgtttaagattttggaacgctatcgacagcaaggtcattttcgcggt
gtctggagcagtgttccggcatccgttgatttgatgagccgcggtgaggcggtcatcgag
agcatgttttcaccagccgtgttcgatttgaaaggtcgcgggattgattgcgtctacgcc
tcgcccaaggaaggctatcgagcttggcacggtgtgatgtgcttgtcgtccaagacaacc
ggtccggtcaaggatgccgcgtatgaatacatgaattggtggttgtcgggatggccggga
gcattcattgctcgccaaggctattacatctccaacccgcaacgttcgcgtgaagagctt
agcgaagcggagtgggattactggtatcaaggcaaacctgccgcgacagatttgcttggc
acaactgggcaggttgttgttaaccaagggcaacgtcgtgacggcggttcttatgtcaag
cgattcagcaacgttgcggtttggaacacggtgatgaaatcttacgaagccagccttcga
cactggaatgagttcctggcaggatga
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