Rhodopirellula baltica: RB3915
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Entry
RB3915 CDS
T00134
Symbol
dpoL
Name
(GenBank) putative DNA polymerase related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB3915 (dpoL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB3915 (dpoL)
Enzymes [BR:
rba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RB3915 (dpoL)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RB3915 (dpoL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD73481
UniProt:
Q7UTF5
LinkDB
All DBs
Position
complement(2023447..2024937)
Genome browser
AA seq
496 aa
AA seq
DB search
MTASEECLSVRATRWDDWRVTSRRLLISGAAPETIHWIDGRSKSGRKQSDLFGSADVEPV
VGEPSAEAEGQHAAGFSSPFRVPKAFLNLARHVSCHRSPGRWELLYRLLWRITGGEKHLL
TNAADRDVHTATKLEKSVSRDAHKMKAFVRFREIEDAEGKRFVAWHRSDHYTLELVADFF
ARRFDVMRWAILTPDESAIWDGKKLTMGDGAPRSDAPEADELEEVWKTYYANIFNPARIK
LNAMRAEMPKKHWATMPETALIDDLVRNAPTRVETMIRHAEGGVSARPFLPEVSTGESSQ
SIARLREAAAVCQGCDLHGPATQTVFGVGNPNAKLVLVGEQPGDREDLAGEPFVGPAGQL
LRETLNDVGLDPAELYITNSVKHFKFKPTGKRRLHVKPAAREVAACRPWLEAELDVIRPK
MVVALGATAAGVLLGPGFRLLKSRGQVQRSDHAKWTIATYHPSAILRVPNEATRETMRQA
FLDDLHFAAEHYRMLP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgtccgaagaatgtttgagtgttcgggcgacgcggtgggatgattggcgagtg
acgtcgcggcggttgctaatcagcggcgccgctccggaaacaattcactggattgatgga
cggtcgaaatcggggcgaaagcaatctgatcttttcggttcggccgacgtcgagccagtc
gtcggcgaaccgtccgccgaagctgaaggtcaacacgcggccggtttttcgtcgccgttt
cgcgtccccaaggcgtttttaaatctggcacgccatgtttcgtgtcatcgctcgcctggt
cgctgggaattgctgtaccggttgctgtggcggattaccggtggtgaaaagcacttgctg
accaacgccgcagatcgagatgttcacaccgcgacgaaattggaaaaatccgtcagtcgc
gacgctcacaagatgaaggcgttcgtccgttttcgcgagattgaagacgcggaagggaaa
cgctttgtcgcatggcaccgttctgatcattacacgttggaattggttgccgatttcttc
gcacgtcgtttcgacgtgatgcgttgggcaatcttgacgccggatgagtccgcgatttgg
gatgggaagaagctgacaatgggcgatggggctcctcgcagcgacgcacccgaagcggac
gaattagaagaggtttggaagacgtactacgcgaacatcttcaatccggctcgcatcaag
ctgaatgcgatgcgtgcggaaatgcccaagaaacactgggcaacaatgcccgaaacagcg
ttgatcgacgatttggttcgcaacgcaccgacacgcgtcgaaacgatgatccggcatgcg
gaaggcggtgtctcggctcgaccgttcctgcccgaagtctcgaccggcgagtcatctcaa
tccatcgctcgtttgcgtgaagcggcggcggtgtgccagggatgcgacttgcacggacca
gccacgcagaccgtgtttggtgtgggcaatcccaatgcgaaattggtgttggtgggcgag
caacccggtgatcgtgaagacttggcaggtgaaccttttgtcggaccggccggtcagttg
cttcgagaaacattgaacgacgttgggttggatccggcggagctgtacatcaccaattcg
gtcaaacatttcaagttcaaaccgacgggcaagcgtcggctgcatgtcaaaccggccgcc
agagaagtcgcggcgtgccggccttggttggaagctgagctggacgtgattcggccgaag
atggtcgtggctcttggagcgaccgcggcgggagttctgctcggtcccggcttccgattg
ctgaagtcacgcggtcaggtgcaacggtcggatcatgccaaatggacaatcgcgacgtat
cacccatcggcaatattgagagtgcccaacgaggcgactcgcgagacgatgcggcaagcg
ttcttggatgacctgcacttcgcggcggagcactaccggatgttaccgtga
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