Rhodopirellula baltica: RB5620
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Entry
RB5620 CDS
T00134
Name
(GenBank) DNA polymerase, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB5620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB5620
Enzymes [BR:
rba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RB5620
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RB5620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD74341
UniProt:
Q7URJ7
LinkDB
All DBs
Position
2928859..2929824
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AA seq
321 aa
AA seq
DB search
MLELPRNDRFFDAKTPLQLLMTSSENDLDPGETHEAAGELLAHLQRVGIRFIPQPKAESV
ESWKSRWIQDAASSESPSPVAAASSPQPSPQASAAGSSIGPEVKTPPRAPEGRLQPVESF
SACDDPYPGTSLPIAERENQLTNLASVVAGCTKCTLLAKCRTQTVFGEGNPAARFAFFGE
APGADEDRLGRPFIGKAGQLLDKMVQACKLQREDIYLLNTVKCRPPENRNPEPTELANCR
EYFEQQLQILRPEYIVCLGAVSAHSLLKTKLSIGRLRQRFHQYHESKVLVIYHPAYLLRN
PDAKKAAWADLQMLMRDAGLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaacttccccgcaatgaccgtttttttgacgcgaaaacgcctctccagttgctc
atgacctcctcagaaaacgacctcgaccccggcgaaactcacgaagccgccggagaactg
ctggctcacctgcagcgggttggcattcgttttattccccaacccaaggcggaatcggtc
gaatcgtggaaatcacgctggatccaggatgctgcctcatctgaatcaccatcgcccgtc
gcagcagcgtccagcccgcaaccatctcctcaagcatccgccgctggctcgtcgatcggg
cccgaggtcaaaacgcctccgcgagcccccgaaggcaggctgcaaccggtcgaatccttc
tccgcatgcgacgatccctaccccgggaccagcttgccgattgcggaacgcgaaaaccag
ttgacgaatttggcatcggttgtcgccggatgcaccaaatgcaccttgctggccaagtgc
cggacccaaaccgtctttggcgaaggaaatccagccgcgagattcgcgttctttggcgaa
gctcccggagccgacgaggatcgattgggacggccgttcatcgggaaggctgggcaattg
ctcgacaaaatggttcaggcctgcaagcttcagcgggaagacatctatctgctgaacacg
gtcaagtgccgaccgcctgagaaccgaaaccccgagccgaccgaattggcgaattgccgc
gaatactttgagcaacaacttcaaatcctgcgtcccgaatacatcgtgtgtctcggtgcg
gttagtgctcattcactgctgaagaccaagctttccattggtcgacttcggcaacgcttt
caccaataccacgaaagcaaagtgttggtgatctatcacccggcgtacttgctgagaaat
ccagacgcaaaaaaagcagcctgggccgatctgcagatgctgatgcgagacgcgggttta
gcctga
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