Rhodopirellula baltica: RB5804
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Entry
RB5804 CDS
T00134
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB5804 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB5804 (pnp)
03016 Transfer RNA biogenesis [BR:
rba03016
]
RB5804 (pnp)
Enzymes [BR:
rba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RB5804 (pnp)
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RB5804 (pnp)
Transfer RNA biogenesis [BR:
rba03016
]
Prokaryotic type
tRNA degradation factors
RB5804 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
CAD74445
UniProt:
Q7UR95
LinkDB
All DBs
Position
3040160..3042616
Genome browser
AA seq
818 aa
AA seq
DB search
MSRIGNVAWRFSRFFTLLRGDPVRRSFPSAVVADKALLARDENRAGFGKAVQIVVCCVDA
GKEVVVSVQKVRVERKIGDSVLSFETGHIAKQAAGSVLVQYGETVVLVAAASGTPRPGID
FFPLMCDYRERLAAAGKFPGGFLKREGRPSTKEILSSRLMDRPIRPLWPAGYKDEVQVQA
CVIASDLQNDGDVLAMIGGATALHISPLPFKGPLGSVRVGKVDGKLVAFPTADQLEQSEL
DMIVSGSRDMVAMIEGFANEMPEDEMMEAIGFAHDAIREVIDLQEEFYKKVNPEKTPYQS
PEDDGLLQRLTDAYYSDFKTAQQTSGKQARAEAVRAVRDRAMADVIPDPNAADAVCVNRF
KSVWHDLEEKVVRDLILAGTRPDGRDHNSLRAIHCETDLLPRVHGSALFQRGETQALITI
ALGTSRDEQRVDGLQDEYSKKFMLDYNFPSYSVGECRPIRGPGRREIGHGCLAERSVAPV
LPSADDFPYTIRVISDITESNGSSSMASVCGATLGLMASGVPISNPVAGISVGLVQDGPD
NWCLITDILGTEDHFGDMDFKIAGTQNGITGIQLDLKVTGVTNDIIRATLKQSREARIEI
LKKMLTTIPRPRREISPTAPRLLRTKISPDKIGALIGPGGKNIRGIQETTGAVIEVDDEG
TVLVASSNKESAQEAMRQVEACTATVQIGKIYDGTVSSIKEFGAFVEILPGRDGLVHISE
MSGGYISSLDQVIAVGDAMKVLVIDVDEHDRVKLSRRKALEELGEEDPLAVEGEGGGDSE
GGGDGEDRPRRRRGGSGGGGGGGRGRGPRRSGGGRDRD
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacgaatcgggaatgtcgcttggcgattttcgcgattcttcacgttgttgcgtggc
gacccagttcgccgctctttcccatcagccgttgtggctgacaaggccttgttggccagg
gatgaaaatcgggccggcttcggaaaagccgttcaaattgttgtttgttgtgtagatgca
ggaaaagaggttgttgtgagtgttcaaaaagttcgcgtggagcgaaaaattggtgattcg
gtgctgtcgtttgagacaggacacatcgctaaacaagcagccggcagcgtgctggttcaa
tacggcgaaaccgttgtgctggtcgcggccgcatcgggtacgccacgtccgggaatcgat
ttcttccccttgatgtgtgattatcgcgagcgattggctgcagctggtaaattccctggt
ggcttcctaaaacgcgaaggtcgtcccagcacaaaagaaatcctcagctcgcgtttgatg
gatcgcccgatccgaccgctttggccagccggttacaaagatgaagttcaagtccaagct
tgcgtgatcgccagcgacttgcaaaacgacggcgacgtattggcaatgatcggtggcgct
accgcgttgcacatcagcccactgccattcaaaggccctctgggtagcgttcgagtcggt
aaggttgacggcaaattggttgccttcccaaccgccgatcaactcgaacaaagcgagttg
gacatgatcgtcagcggcagccgtgacatggttgccatgatcgaaggctttgccaatgaa
atgcccgaagacgagatgatggaagcgattggcttcgcccatgacgccatccgcgaagtc
atcgacctgcaagaagagttctataaaaaggtcaacccagagaagactccttaccagtca
cctgaagacgacgggttgcttcagcgtttgaccgacgcctactacagcgacttcaaaacc
gctcaacaaacttcgggtaagcaagctcgtgcggaagccgtccgtgccgttcgcgatcgt
gcgatggccgacgtcattcctgatcccaacgctgctgacgccgtttgcgtcaaccgcttc
aaatcagtctggcacgacctggaagaaaaggtcgttcgcgacctgatcctcgccggcacc
cgccccgatggccgcgaccacaactcgcttcgcgccattcactgcgaaaccgacttgttg
ccacgcgttcacggttcggctttgttccaacgtggcgaaacccaagctctcatcacgatc
gcattgggaaccagccgcgacgaacaacgcgtcgatggcctgcaggacgagtacagcaag
aagtttatgctggactacaacttcccttcgtactcggttggcgaatgccgtccgattcgt
ggacctggacgtcgtgaaatcggacacggttgcttagccgagcgtagcgtcgctcccgtg
cttccttccgccgacgacttcccctacacaattcgcgtgatcagcgacatcaccgaatcg
aacggtagctcctccatggcttccgtttgtggtgctaccctcggcctgatggcttcgggt
gttccaatcagcaacccagtcgctggtatctcggtcggcctcgtccaagacggtcctgac
aactggtgcttgatcactgacatcctcggaaccgaagaccacttcggcgacatggacttc
aagatcgctggtactcaaaacggtatcaccggtatccagttggacctcaaagtcaccggt
gtcactaacgacatcatccgcgccacgctgaaacaatcgcgtgaagctcggatcgagatc
ctgaagaagatgctgacgacgatcccacgtcctcgtcgcgaaatctcgccgaccgctcct
cgtctgcttcgcacgaaaatctcgcccgacaagatcggtgccttgatcggtcctggcgga
aagaacatccgtggaattcaagaaacgaccggtgcggtcatcgaagtcgatgatgaaggc
accgtcttggttgccagcagcaacaaagagtcggctcaagaagccatgcgtcaggtcgag
gcttgcacggcaaccgttcagattggcaagatctacgacggcaccgtcagcagcatcaaa
gagtttggtgccttcgttgaaatccttcccggtcgcgatggactggttcacatcagcgag
atgagtggcggatacatcagcagcctggaccaagtgatcgccgttggcgacgccatgaag
gtcttggtcatcgatgttgacgaacacgatcgcgtgaagctcagccgtcgcaaagctctc
gaagagctcggcgaagaagatcctttggccgttgaaggcgaaggtggcggcgacagcgaa
ggcggtggcgacggtgaagatcgcccacgtcgtcgacgcggcggcagcggcggtggtgga
ggcggaggtcgcggacgcggcccacgtcgaagcggtggcggacgcgatcgcgactga
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