Rhodopirellula baltica: RB6215
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Entry
RB6215 CDS
T00134
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase (serine methylase SHMT)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rba
Rhodopirellula baltica
Pathway
rba00260
Glycine, serine and threonine metabolism
rba00460
Cyanoamino acid metabolism
rba00630
Glyoxylate and dicarboxylate metabolism
rba00670
One carbon pool by folate
rba00680
Methane metabolism
rba01100
Metabolic pathways
rba01110
Biosynthesis of secondary metabolites
rba01120
Microbial metabolism in diverse environments
rba01200
Carbon metabolism
rba01230
Biosynthesis of amino acids
rba01240
Biosynthesis of cofactors
rba04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RB6215 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RB6215 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RB6215 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RB6215 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RB6215 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RB6215 (glyA)
Enzymes [BR:
rba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RB6215 (glyA)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
CAD74668
UniProt:
Q7UQN2
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All DBs
Position
3257871..3259133
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AA seq
420 aa
AA seq
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MSFIQSQDPAIWDAIQAETTRQQDGLEMIASENYTSPAIMEAVGSILTNKYAEGYPGRRY
YGGCEHVDVVETIAIDRAKELFGAEAANVQPHSGSQANAAVYLSCLEVGDTVLGLDLAQG
GHLTHGMKLNMSGRLYNFVNYGVDKVNHRLDFDQIVKLAREHKPKLIVAGASAYPREIPH
DRFKEIADEVGAKLMVDMAHYAGLVAAKIHNSPVPYADYVTTTTHKTLRGPRSGLIMCKE
EHLKLVNRNVFPGTQGGPLMHVVAGKAICFAEAMTEEYAHYGQAVVDNAKTLADTLLSCG
LRLVSGGTDNHLMLVDVTAVDLGGKKAEAVLDACGITVNMNMIPFDQRKPMDPSGIRIGT
PALTTRGMGGDEMKRIGQWIYNALSDSDNAALHESIRTEIREMVQAFPVPAAAESPATVA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcattcagtcacaagaccccgccatttgggacgcgatccaagccgaaacgact
cgtcagcaagacggtttggaaatgatcgccagcgaaaactacaccagcccagcgatcatg
gaagccgttgggagcatcctgaccaacaaatacgcggagggttatcccggccgtcgttac
tacggcggttgcgagcacgtcgacgtcgtggagacgattgcgattgatcgagccaaggag
ttgttcggtgccgaagccgccaacgtccagcctcacagtggttcgcaagccaacgcggcg
gtgtatctgagctgcctcgaagtcggtgacaccgtgctgggattggatttggcccaaggc
ggccacctgactcacggcatgaagctgaacatgagcggccgactctacaacttcgtcaac
tacggcgtggacaaagtcaatcatcgcttggacttcgaccaaatcgtcaaattggctcgt
gagcacaaacccaagctgatcgtcgctggtgcaagtgcttaccctcgcgaaattcctcac
gatcgattcaaagaaatcgcggatgaggtcggcgcgaagctgatggtcgacatggcccac
tacgccggtttggtcgccgcaaaaattcacaacagcccagtgccgtatgcggactacgta
accacgacgacccacaaaacgcttcgtgggcctcgcagtggcctgatcatgtgcaaagaa
gagcacctgaaactcgtcaaccgcaacgtgttccccggcactcagggtggcccgttgatg
cacgtcgttgcgggcaaggcgatctgcttcgccgaggcgatgaccgaggaatacgcccat
tacgggcaagctgtggtcgacaacgcgaaaacgttggccgacaccttgctgagctgtgga
ctgcgactggtcagcggcggaaccgacaaccacctgatgctggtcgatgtcaccgctgtg
gatctgggtggcaagaaagccgaagcggtcctcgatgcttgcggcatcacggtgaacatg
aatatgatcccatttgaccaacgtaaaccgatggatccatctggtatccgaatcgggacg
ccggcactgaccacccgtggaatgggtggcgacgagatgaaacgaatcggccaatggatt
tacaatgcgttgtccgattccgacaacgcggcgcttcacgaatccatccgcaccgaaatt
cgcgaaatggtgcaggcattccctgtccctgccgccgctgaatctcccgccaccgttgcc
tga
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