Rhodopirellula baltica: RB6491
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Entry
RB6491 CDS
T00134
Name
(GenBank) RNA polymerase subunit sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rba
Rhodopirellula baltica
Pathway
rba02020
Two-component system
rba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RB6491
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RB6491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rba03021
]
RB6491
Transcription machinery [BR:
rba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RB6491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HD_5
LacI
HTH_Crp_2
HTH_23
MarR
HTH_Tnp_ISL3
HTH_21
Motif
Other DBs
NCBI-ProteinID:
CAD74836
UniProt:
Q7UQ69
LinkDB
All DBs
Position
complement(3437096..3438676)
Genome browser
AA seq
526 aa
AA seq
DB search
MAPNSLTRFSLRWRPSLRFTSRISEKTLMRMSVGLQARQSQVQKLAPRMIQSMEILQMPT
LALQERIEQEMNENPLLEQQTGDPLNPDDGDDEIPDKDTRSESEKELVVDNDHDNKDDFE
RLLNMDSDLPSTFDDSFRQSANRMSEDADRRHDMMANAQSRPESLNDYLLHQLAEMDIDD
EVEQIAERIISTLNASDGGYLRMPLADLLPSGHSKEDFEKAEEALAVVQSLEPSGIAARD
LSECLISQLDPSVAHFDELSTLIRSHLNDLAENRLPQISKKTGFSIELIQELREELHLLN
PKPGAAFLETYVPNVTPDIILEQDESGEYRVRLDDDRVPTLFISEYYRRRLQASDCSDAE
REFIKQKINGAQWLIDSIEQRRSTLTRVSEAIVEHQKRFLDEGPEAIEPLKMQQIADKVG
VHVTTVSRAVDDKWIQTPRGILPLRRFFVGGTQTEDGDDVAWDTIRLKLQELIDKEDKSK
PYSDENLVDELKKAGMTVARRTVTKYRKKMGIPSSRQRRDWSLTAS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttggcaccgaattcgctcactcggttctcgctgaggtggcgaccttcccttcgattcacg
tcacgcatttcagaaaagactctcatgcggatgtcagtggggcttcaggcccggcaaagc
caagtacagaaactcgctccacggatgatccagtcgatggaaatcctgcagatgcccacg
ttggcattgcaggaacgcatcgagcaggagatgaacgagaatcctttgctggagcaacag
accggggatccattgaacccggacgatggcgatgacgagatccctgacaaggacactcgc
agcgaaagcgaaaaagaacttgttgtcgacaacgatcacgacaacaaggatgacttcgag
cgtttgctgaacatggactcggatttgccgagcacgtttgatgattcatttcgtcaaagt
gcgaaccgcatgtcagaagacgctgaccgtcgccacgacatgatggccaacgctcagtcg
cggcccgaatcgctgaacgactatttgctgcatcagctcgcggagatggacatcgatgac
gaggtggagcaaattgccgaacgcatcatcagtacgctgaatgcttccgatggcgggtat
ctgcggatgccgttggctgatcttttgccatctggccattcgaaggaagactttgaaaaa
gccgaagaagcattggcagtggttcaatcattggaaccaagcggaatcgcagctcgcgat
ttgagcgaatgcttgatctcgcaattggatccctcggtcgcgcacttcgatgaactgtcg
acattgattcgatcgcatctcaatgatttggcggagaaccgactcccgcaaatcagcaag
aaaaccggtttctcaatcgagttgattcaagagcttcgcgaagaactgcatctcttgaat
ccgaagccaggcgcagcgttcttggagacctatgttccgaacgtgacgccggacatcatt
ttggagcaagatgaatcgggcgagtatcgagttcgcctggacgatgatcgagtgccgacc
ttgttcatcagcgaatactaccgccgtcgattgcaagcttcggattgctctgatgcggag
cgggaattcatcaaacaaaagatcaacggcgcacagtggctgattgattcgatcgaacaa
cgtcgcagtactttgactcgggtatccgaagccattgtcgagcatcaaaaacggttcttg
gatgaaggtccagaagcgattgagcctctcaagatgcagcaaatcgcggacaaggtcggt
gtccacgtgacaacggtgagtcgcgcggtggacgacaaatggattcaaactccccgcgga
attcttccgctacgtcggtttttcgttggtgggacccagaccgaagacggcgacgatgta
gcttgggacacgatccgcttgaaactccaagagctgatcgacaaggaagacaagagcaag
ccttacagcgatgaaaatctcgtcgatgagttgaagaaagctggtatgaccgtcgcccgc
cgaaccgtcaccaaataccgaaagaagatggggattcctagcagtcgtcaacgtcgcgat
tggagtctcaccgcgtcgtga
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integrated database retrieval system
