Rhodopirellula baltica: RB6780
Help
Entry
RB6780 CDS
T00134
Name
(GenBank) sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rba
Rhodopirellula baltica
Pathway
rba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RB6780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rba03021
]
RB6780
Transcription machinery [BR:
rba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RB6780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_23
Sigma70_r4_2
HTH_36
MarR_2
MerR_1
HTH_Tnp_ISL3
HTH_17
KORA
Rv2175c_wHTH
HTH_Tnp_Tc3_1
DUF4777
Motif
Other DBs
NCBI-ProteinID:
CAD75002
UniProt:
Q7UPQ9
LinkDB
All DBs
Position
3603381..3605054
Genome browser
AA seq
557 aa
AA seq
DB search
MHTSYRNIAVKELRDQLSRFSPRAKKIEQSLLAEKLLSEIQPDRDYSMDYVTFRITNYRP
ESSLRQTIASADLVHDLRLLIEDLSDSADIGANEAGEHVHTVADLSRNFHVSTKTISRWR
DAGLVSRKFLFGKRKRVGFLNSSVDRFIANNRDKVRRGERFSQLTDNEKTEMVERARQLV
EGGATFAEVIQQIATIMHRSPETVRYTLKNFDAKNRQLAIFPHHRETLSDEDKRVIHQLQ
LHGATIPQLCKRFKRTRTSIQRILNEVRMQHLLEMPLEYIYNEDFEDASRENEYLAEMPV
SETARKVRAPSELPSYLAALYDVPLLTREQEGHLFRKMNYLKHRANKLRQSLTDADRMDT
AVMDQIQSLYEEAVKVKNKIVQANLRLVVSIAKRHVASAEDFFSLISDGNMSLIRAVEKF
DYSRGNKFSTYASWAIMKNFARTIPNEFKHRDRFRATPDEMFVAHQDERLDPYLEETVQL
QRQRELARILDRLDEREQKIITARFGLQRGVEPLTLKEVGEEMGVTKERVRQLEARALSK
LRDAARDAKIDVELGAS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgtcttaccgaaacattgctgtcaaagaacttcgcgatcaactgtctcgcttt
agccctcgagccaagaagatcgaacagtcgttgttggccgagaaattgctgtcggaaatt
cagcccgatcgcgattactcgatggactacgtcacgttccgtatcaccaattaccgcccc
gaatcatcgttgcgacaaacaatcgcgtcggctgatttggttcacgacctgcgtttgcta
atcgaagacctctccgactcggccgacatcggcgccaacgaggccggcgaacacgttcat
accgtggccgatctcagccgcaattttcacgtttcaaccaagacaatcagccgctggcgc
gatgcaggtttggtcagccgcaaattcctctttggcaaacgcaaacgcgttggattcctc
aacagcagcgtcgatcgattcatcgcaaacaaccgcgacaaagtccgccgtggcgaacgc
ttcagccaactgaccgacaatgaaaagaccgagatggtcgaacgtgctaggcaattggtc
gaaggcggcgccaccttcgccgaagtgatccagcaaatcgcgacgatcatgcatcgttca
cctgaaacggttcgctacacgctgaagaatttcgacgctaaaaatcgccaactggcaatc
ttccctcatcaccgggaaacgctcagcgacgaagacaagcgagtcattcaccaattgcaa
ttgcacggtgcgaccatcccgcaactgtgcaaacgattcaaacgaactcgaaccagcatc
cagcggattttgaacgaagttcgaatgcagcatttgctcgagatgcctctcgagtacatc
tacaacgaagacttcgaagacgcctctcgcgaaaacgagtacttggctgagatgcccgtt
tccgagacggctcgcaaagtacgcgcaccttcggaattgccaagctacttggctgcgttg
tacgacgtgcctttgctaacgcgggaacaagagggtcacctcttccgcaaaatgaactac
ttgaaacaccgtgcaaacaaactgcgtcagtcgttgacagacgccgaccgcatggacacc
gcagtgatggaccaaatccaatcactgtacgaagaagcggtcaaagtgaagaacaagatc
gtacaggcaaacttgcgtttggttgtttccatcgcgaaacgccacgttgcatcggcggag
gatttcttctcgctgatcagcgacggcaacatgtccttgatccgtgcggtcgagaaattt
gattactcgcgtggcaataagttcagtacctatgcctcttgggcgatcatgaaaaacttc
gctcggaccattccgaacgagttcaaacatcgcgatcgtttccgagcgacgccggacgag
atgttcgtcgcacatcaagacgaacgtttggacccgtatttggaagagacggttcaattg
caacgtcaacgtgagttggctcgcatcttggatcgactggatgaacgcgaacaaaagatc
atcacagctcgctttggtctacaacgcggcgtggaaccgttgaccttgaaagaggtcggc
gaagaaatgggcgtgaccaaggaacgcgttcgtcagttggaagctcgtgcactgagcaaa
cttcgcgatgcagcacgagatgccaagatcgatgtcgaactgggtgccagctga
DBGET
integrated database retrieval system
