Rhodopirellula baltica: RB7569
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Entry
RB7569 CDS
T00134
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB7569 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB7569 (mutM)
Enzymes [BR:
rba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RB7569 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RB7569 (mutM)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RB7569 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
zf-FPG_IleRS
Ribosomal_S13
DUF8259
Motif
Other DBs
NCBI-ProteinID:
CAD75439
UniProt:
Q7UNI0
LinkDB
All DBs
Position
4065806..4066708
Genome browser
AA seq
300 aa
AA seq
DB search
MPELPEVETMCRGISPIVGCEIERVDLPPCHCRPITMEPSVAILNRRLRGRRVTSIQRRG
KRVMLCFDDQSRLVIEPRMTGLVLLADPPDPDHLRLRIQFRSPHNRSTMRSREIPTEMLV
WDRRGLGTIRWMTERDYLEKVDSRLGPDAMCITAEQLRANLAASKRPIKVALLDQSAVAG
IGNLYAAEILFLAGVDPRTRCDRLTKPQWERIHPAITLVLQDAINHEGSTLSDGTYRNAL
NDPGNYQNMHRVYDREHLACPRCEDGVVRRIVQAQRATFFCPGCQRKSGRHPSISPPTAT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgccggaagtcgaaacgatgtgccgcgggatctctccaatcgtcggatgc
gagattgagcgagtcgaccttccaccgtgtcattgtcgaccgatcacgatggaaccatcg
gtcgcgatcctcaaccgtcgtcttcgaggccgccgtgtcacatccatacagcggcgtggc
aaacgcgtgatgctttgcttcgacgatcaatcgcgactcgtcatcgaaccccggatgacc
gggttggtgctgttggctgacccacccgatcctgaccacttgcgattacgcattcagttt
cgctcaccacacaatcggtcaacgatgcgatcccgcgaaataccaaccgaaatgctggtc
tgggatcgccgcggcctggggacgatccgctggatgaccgaacgagactacctcgaaaaa
gtcgattcgcgtttgggtcccgatgcaatgtgcatcaccgcggaacaactgcgagcaaac
ttggccgcctcaaaacgccctatcaaagtggcgttgttggaccaatctgctgttgccggg
attggcaacctgtacgcagccgagattctgtttttagcgggcgtcgacccacgcacacgt
tgcgaccgactgaccaaaccacaatgggaacgcattcatcccgccatcacgttggtgctg
caagacgccatcaaccacgaaggcagtacgctgagcgatgggacgtatcgcaacgcactg
aatgatcccggcaattaccagaacatgcatcgcgtctatgatcgcgaacatttggcgtgt
cctcgttgcgaggacggggtggtccggcggatcgtgcaagctcaacgggcgacgttcttt
tgtccgggatgccaacgcaaaagcggtcggcaccccagcatctcgcctccaaccgcaacg
tga
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