Rhodopirellula baltica: RB7627
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Entry
RB7627 CDS
T00134
Name
(GenBank) conserved hypothetical protein-possibly involved in signal transduction
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB7627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB7627
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RB7627
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF1616
Motif
Other DBs
NCBI-ProteinID:
CAD75476
UniProt:
Q7UNE3
LinkDB
All DBs
Position
complement(4102093..4103661)
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AA seq
522 aa
AA seq
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MNPQLASTILYCLFFFFLGIAAVLAFIQRQAVKRRERLDAEAEAVLESARREAETRGNQI
IVDAREKALAIKAEADREVAAMRETEQIRDRKLDAREDQLASGQESLRKAQRGLESSQTR
LAAQMRNLTEQRAELDRLVQESQRALEKVSGMTQEEAAEKLMQSLRQDLEHEIGSTVLKH
QRELGRRVDAQAREMLLTAMQRYASVHTADTTTSTVGVPTDDMKGRIIGREGRNIRAFEK
ATGVDLIIDDTPGVVVVSGFDPVRREVARMSLEKLIADGRIHPSKIEETVEQAGKEIQAF
ILQKGQEAAGEVNVSGLHDRVIEMLGRLHFRTSYSQNVLRHSVEVAFLAGMMAEMIGLDG
DLARRCGLLHDIGKAADHELEGGHPKIGADLLRRSKENDEVVHAAKGHHDEIVTEFPYTM
LVATADACSASRPGARRESLERYVKRMEELESIAQRFDGVQQAYAISAGRELRVMVGSQQ
VSDERAAAICRDIASTFEKELTYPGEIKVTVVREARFTNTAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcaactcgcctccacaatcctctattgcctattcttctttttcctcggtatc
gccgctgttctggccttcatccagcgtcaggccgtcaaacgccgagaacggcttgatgcc
gaagccgaagcggtgctcgaatccgctcggcgcgaagctgaaacaagaggcaatcaaatc
atcgtcgacgctcgcgaaaaagcattggccatcaaggccgaagctgatcgtgaggtcgcg
gccatgcgcgaaacggaacaaatccgtgatcgcaaactcgacgctcgagaagatcaactc
gcgtcgggacaagagtcgctgcgcaaagcccaacgtggtctagaaagcagccaaacgcga
ttggccgcccaaatgcggaacctgaccgagcaacgtgctgaattggatcgattggtccag
gaaagtcagcgagcactcgaaaaggtcagcggtatgactcaggaggaagccgcagagaag
ttgatgcaatcgctgcgtcaagatctcgagcacgagatcggctcgacggtgttgaagcat
caacgagagttggggcgacgtgtcgacgctcaggctcgcgaaatgttgctcaccgcgatg
cagcgttacgcgtcggtgcatacagcggacaccacgaccagcacggttggggtgccaacc
gatgacatgaaaggccgcatcatcggtcgcgaaggtcgcaatattcgcgcctttgaaaaa
gccaccggtgtggacctgatcattgatgacacccccggtgtggtcgtggtcagtggtttt
gatccggtccgccgcgaggtcgctcgcatgtcacttgagaagctgatcgcggacggtcga
atccatccttcgaaaatcgaagagacggtggagcaagctggcaaagagatccaggcgttt
atcttgcaaaagggccaagaagcagctggcgaagtgaatgtgtcagggcttcacgatcga
gtgatcgagatgcttggaagattgcatttccgaacgtcgtacagccaaaacgttctgcgg
cacagtgtcgaagtcgcgttcttggccggcatgatggctgagatgattggactggatggt
gatctggcgcgtcgttgcggattgcttcacgacatcggaaaagccgcggaccacgagctc
gaaggtgggcacccgaagattggtgccgacttgcttcgtcgcagcaaagagaatgatgaa
gtggtgcacgcggccaaggggcaccacgacgaaatcgtgacggagtttccgtacacgatg
ttggtcgcaactgcggatgcatgcagtgcgtcccggcccggtgcccgtcgcgaatcgttg
gaacgttatgtcaagcgaatggaagagttggagtcgattgctcagcgttttgatggtgtg
cagcaggcctatgccatctccgcggggcgtgaattgcgagtgatggtcggcagccaacaa
gtcagcgacgaacgagccgcagcgatctgccgcgacatcgcatcgacctttgaaaaagaa
ctgacctaccccggtgagatcaaagtcaccgtggtccgcgaggctcgtttcaccaacacg
gccaagtaa
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