Rhodopirellula baltica: RB8082
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Entry
RB8082 CDS
T00134
Name
(GenBank) conserved hypothetical protein-putative a deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rba
Rhodopirellula baltica
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB8082
Enzymes [BR:
rba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RB8082
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RB8082
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
CAF1A_dimeriz
Motif
Other DBs
NCBI-ProteinID:
CAD78460
UniProt:
Q7UG69
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All DBs
Position
4328116..4329816
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AA seq
566 aa
AA seq
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MVRFQVSARTKIAGLGQGRAGQGCVSATVNTREDNSRPPFTGPVMTKIRHLVLVLGDQLN
HDSEAFTDFDPQSDRVWMAENDEEATHVWCHQTRLVGFFSPMRHFREELIQRGFDVIYHE
LTGDRRKARESSFASVLRKTLSAHSVEKILVVAPGDYRVREQLKATAEQEDVPLEFLTDN
HFYCSPDQFDDWASGRKSMVMEQFYRTMRKEHSILLDEEGAPEGGQWNFDQDNRKTFGKG
GPKEVPPTPSFKPDSITQEVIAMVRDRFEDHPGKVDQFDLPVCRDDALNSLDDFIEHRLP
LFGTYQDAMWEGETFLYHSRLSHSINLHLLSPKEVVDAAVKAYKDGNAPLNCVEGFVRQI
LGWREYVRGVYWNRMPDYEERNALHCDSEQDVPPFFWDGNTDMACVSDAMRLLVDTAYAH
HIQRLMVLGLFAQLFGTHPLRFHHWHMAMYADAIDWVSLPNALGMSQYGDGGLMATKPYC
ATGKYINRMSNHCKNCRYDPAKSTGEDACPFTTLYWDFLDRHKQQFQNNNRMTLQLKNIE
RKDSSEWTAIRSRARKIRSGTIKLQQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggttcgcttccaggtgtctgcgaggacaaaaattgcgggtttggggcagggcagagca
gggcagggttgcgtcagcgctaccgtgaatacgcgtgaggataattcgagaccgccgttt
actggacccgtcatgacaaaaattcgccatctcgtcctcgtgttgggtgatcaactcaac
cacgattccgaggccttcaccgatttcgatccccaatccgatcgagtttggatggcggaa
aacgacgaagaagccacccatgtttggtgccatcaaactcgcctggttggctttttcagc
cccatgcggcactttcgcgaggaattgatccagcgtggattcgatgtgatctaccacgaa
ctgaccggtgatcggcgaaaggctcgcgaaagttcttttgccagcgttctgcggaaaacg
ctctcggctcactcggtcgaaaaaatcttggtcgttgctccaggtgactaccgagtccgt
gaacaactcaaggccaccgccgaacaggaagacgtgccgctcgagtttctcaccgacaat
cacttctactgttcgcccgaccaatttgacgattgggcatcgggtcgcaaatcgatggtg
atggaacagttttatcgaacgatgcgaaaggagcacagcatcctgctcgacgaagaaggt
gcccccgaaggcgggcagtggaatttcgaccaagacaatcgcaagacgttcggcaaaggc
ggacccaaagaagtaccgccgactccatcgttcaaacctgactcgatcactcaggaggtg
atcgcgatggtgcgagatcgattcgaagaccatcccggcaaagtcgaccagttcgatctg
cctgtttgccgcgacgatgcgttgaactcgctggacgatttcattgagcatcgattgccg
ctctttggcacctaccaagatgcgatgtgggagggcgaaaccttcctctatcattcgcga
ctctcacactcgatcaacttgcacctgctgtcgccgaaagaggtcgtcgatgcggcggtg
aaagcttataaagatggcaatgcaccgctgaactgcgtcgagggttttgttcgacaaatc
cttggatggcgagaatacgtccgcggcgtctattggaaccgaatgccggactacgaagaa
cgcaacgcactccactgcgactcggaacaagatgttccgccattcttttgggacggcaac
accgacatggcctgcgtttccgatgcgatgcgtttactggtcgacacggcctacgcgcat
cacatccaacgattgatggtgcttggattgttcgcccaactctttggcactcacccgttg
cgttttcatcattggcacatggcgatgtacgccgatgcgatcgactgggtgagcctgccc
aacgcacttgggatgagccaatacggtgacggtggcctgatggcaaccaaaccctactgc
gccaccggcaaatacatcaatcggatgagcaaccactgcaagaactgccgctacgatcca
gcaaaatcaaccggtgaggatgcttgcccgttcacgactctgtactgggacttcctcgac
cgtcacaaacaacagtttcaaaacaacaatcgcatgaccctgcaactgaagaacatcgaa
cgaaaagactcctctgaatggacggccatccgttcgcgtgcaaggaagatccgcagtgga
acgatcaaattgcagcagtag
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