Rhodopirellula baltica: RB8253
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Entry
RB8253 CDS
T00134
Symbol
aspS
Name
(GenBank) Aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
rba
Rhodopirellula baltica
Pathway
rba00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RB8253 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rba01007
]
RB8253 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rba03016
]
RB8253 (aspS)
03029 Mitochondrial biogenesis [BR:
rba03029
]
RB8253 (aspS)
Enzymes [BR:
rba01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RB8253 (aspS)
Amino acid related enzymes [BR:
rba01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RB8253 (aspS)
Transfer RNA biogenesis [BR:
rba03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RB8253 (aspS)
Prokaryotic type
Other AARSs
RB8253 (aspS)
Mitochondrial biogenesis [BR:
rba03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RB8253 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
CAD78543
UniProt:
Q7UFY6
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All DBs
Position
4410353..4412131
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AA seq
592 aa
AA seq
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MLRTHTCGALRKSDVGSPVTLCGWVDSKRDHGGAVFIDLRDRYGLTQVVIGPPEANEALI
KQAGHVPNESVILIRGVVADRLEGKTNAKLETGEIEVRSEHFEILSASETPPFTPGQSDL
PGEDLRLKYRFLDLRRKEMQQALIRRSEIIKCMRDYFAEHDFIDVETPILGRSTPEGARD
YLVPSRVHPSNFYALPQSPQLYKQILMVAGFDRYVQVAKCFRDEDLRADRQPEFTQLDLE
MSFVDSEDIIGLIDGLVAKTAKQVLGKDITLPLPRMTYEEAMRRFGSDAPDLRFGLEIVD
VTSVAAKTDFRVFRGTADAGNFVRGINVKDSALKFSRRQIDELTAFVQQDFGAKGLAWFR
VEDDGTLWSPIAKNFDEEHLAEIKALMGGEPGDLLMFLADTWEVTCKGLSGLRKRLAVEL
KLYEDGELNCSWVTEFPMFEKDEEAGRYVAMHHPFTAPLEEDLPLLKESPEKCRAQAYDL
VINGSEAGGGTIRIHDSKVQSQVFELLGMDEETARDRFGFLLDALRFGAPPHGGIALGVD
RWVMLFAGLENIREVIAFPKTQKAADMMTGAPGEVDADQLNELHLRTVSAKT
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgttacgaacccacacctgcggcgcgcttcgcaaatctgacgtcggctcccccgtgacc
ctgtgcggatgggtggacagcaaacgagaccatggcggagccgttttcatcgatttgcgg
gatcgttacgggctgacccaggtcgtcatcggaccgccggaagccaatgaagcactgatc
aaacaagctggccacgtgccaaacgaaagcgtgatcctgatccgcggcgtggtggcggat
cgcctggaaggcaaaaccaacgcgaaattggaaaccggtgaaatcgaagttcgcagcgaa
cacttcgaaatcctttcggcctccgaaacgcctcccttcacacccggccaatccgatctg
ccaggcgaagacttgcgtctgaagtatcgcttcctggaccttcgccgcaaagaaatgcag
caggccctgatccgtcgcagcgaaatcatcaagtgcatgcgggactactttgccgagcac
gatttcatcgacgtcgaaacgcccatcctcggtcgcagcacccccgaaggagctcgcgat
tacctggtccccagccgcgtgcatcccagcaacttctacgcgttgcctcaatcgccgcag
ctttacaaacaaattctgatggtcgccggtttcgaccgctacgtccaagtcgccaagtgt
tttcgcgacgaagacttgcgagccgatcgccaacccgaattcacgcagctcgacttggaa
atgtcctttgtcgactcagaggacatcatcggattgatcgatggcttggtcgccaaaacc
gcaaagcaggttttgggcaaggacatcacgctgccgctgccacgcatgacctacgaagaa
gccatgcgtcgcttcggttccgatgctcccgatttacgattcggtttggaaatcgtcgac
gtcacttcggtggctgcgaagaccgacttccgagtcttccgcggaaccgccgacgccggc
aacttcgttcgtggcatcaacgtcaaagactcggccctcaagttctcacgacgccaaatc
gatgaactgaccgcgtttgttcaacaagacttcggtgccaaaggtttggcttggttccgc
gtcgaagatgacggaacgctttggagcccgatcgcgaagaacttcgatgaagaacacttg
gctgaaatcaaagcactcatgggcggcgaacccggtgacttgctgatgttcttggccgac
acctgggaagtcacctgcaaaggcttgtccggtcttcgcaaacgactggccgtggaactg
aagctctacgaagacggcgagctgaactgcagttgggtgaccgagttccccatgttcgag
aaggacgaagaagccggtcgctacgtcgccatgcaccaccccttcaccgctcctctcgaa
gaagacctgccgcttctgaaagagtcgcccgagaaatgtcgtgctcaagcctatgacttg
gtcatcaacggatcggaagccggtggcggaacgattcggatccacgacagcaaggttcaa
tcgcaagtgttcgaactgctgggcatggacgaagaaaccgctcgcgatcgtttcgggttc
ttgctcgacgcgttgcgtttcggtgcacctccacacggcgggatcgccttgggtgtcgat
cgctgggtgatgctgttcgctggcctcgaaaacattcgcgaagtgatcgcgttccccaaa
acgcaaaaggctgccgacatgatgaccggagctcctggcgaagtggacgcggatcaactc
aacgaactgcatctgcgaacggtgtccgccaaaacctga
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