Rhodopirellula baltica: RB8316
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Entry
RB8316 CDS
T00134
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor whiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
rba
Rhodopirellula baltica
Pathway
rba02020
Two-component system
rba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RB8316 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RB8316 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rba03021
]
RB8316 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rba02035
]
RB8316 (whiG)
Transcription machinery [BR:
rba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RB8316 (whiG)
Bacterial motility proteins [BR:
rba02035
]
Flagellar system
Flagellar assembly proteins
Stator
RB8316 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_23
PCI
Motif
Other DBs
NCBI-ProteinID:
CAD78574
UniProt:
Q7UFV6
LinkDB
All DBs
Position
complement(4441097..4441915)
Genome browser
AA seq
272 aa
AA seq
DB search
MIITEDSMPATATADDPILKVWTSFKSTTKDAPDYEPLRNQLVERYMQLVRYNGERIWQR
LPDGVELDDLISAGMFGLMDAIDAYDTERGVKFETFCVPRIRGAMLDELRKMDWVPRLVR
SKASKLATATKTLEARFGRAPTVQELSAHMEIDVKEVEKMQSEANAVGVVSLNKKWYETD
SYKDVREIDILEDKKGEDPTRRVQKNDLMRLVTKGLNRNERLIIILYYYEELTMKEIGAT
LDLSESRVSQMHTAIVNRLQQQLGVRRLEFGA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatcacggaggattctatgccggctaccgcaactgctgacgacccgatcttgaag
gtatggacttctttcaaatccaccacgaaagatgcgcctgattacgagccgctgcggaat
cagttggtcgaacgctacatgcaattggttcgctacaacggcgaacgcatttggcaacgt
ctgcccgatggcgtggaactagatgacttgatcagtgctggcatgttcggcctgatggac
gccatcgacgcctacgacaccgaacgcggcgtgaagttcgaaacgttctgcgtgcctcga
attcgtggggcaatgctcgatgaacttcgcaaaatggactgggtgcctcgcttggttcgc
agcaaagccagcaaactggccaccgcgacgaagaccttggaagcccgctttggtcgagca
ccaaccgtccaagaattgtcggctcatatggagatcgacgtcaaagaagtggaaaagatg
cagagcgaagccaacgccgtcggcgtcgtctcgctgaataaaaagtggtacgaaacggac
agctacaaagatgttcgtgagattgacatcctggaagacaagaagggggaagaccccact
cgtcgcgtccagaaaaacgatctgatgcgtttggtcaccaaagggttgaaccgcaacgag
cgtctgatcatcatcctgtactactacgaagaactgacgatgaaggagattggggccacg
ttggacctgtctgaatctcgcgtcagccaaatgcacaccgctatcgtcaatcgtttgcaa
cagcaactcggcgttcgtcgcttagagttcggggcttaa
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