Rhodopirellula baltica: RB844
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Entry
RB844 CDS
T00134
Name
(GenBank) probable surface-associated protein cshA precursor
KO
K20276
large repetitive protein
Organism
rba
Rhodopirellula baltica
Pathway
rba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Dockerin_1
Cadherin_3
SdrD_B
CshA_repeat
Planc_extracel
EF-hand_7
N-SET
Motif
Other DBs
NCBI-ProteinID:
CAD71782
UniProt:
Q7UY66
LinkDB
All DBs
Position
445096..449727
Genome browser
AA seq
1543 aa
AA seq
DB search
MTNAKTHHIDPAQPFELPRKQMKNLRQLLRSVSPSSSRKRSEDRSRSNRSNKRRLLSESL
ETRQLLAGDVPSVVDAAPEGEATYAVAHNYWRAYDVDNNKYVTALDALMVINHLNSHGEG
EPLSGSDEFTGFVDVTGDNRVTALDALSVINALNRGEGEADMPLVEFVLAARNLDDTLVD
NTTGATDVLPDDNVELTYNVDVNEVFKLEVGVKDLRGFSATGVFRAVTDIIIDQSDVLEP
AVGEVQSIVFDNTVLNSPLEGNITFSFADNPSVTVTRSLNDFIGGSLGNGSNNLEEIIAQ
LSPLVGSADDVDVQSSINTSAGGPSGGGSYTMEINYSGPDLINVNMPQLQAVLEVNGTAQ
PVNLSQINVQNPDGSFNSTPILRALELNTRNAGNAGVYGQTRSFGSFELGEDLGSGLVDL
FDEIGVLGPGDKSLAQELGSEYNPNLAYDAFSIPVRAVVPATGVSVSLDAPDEGDKVLIY
GTEVGKESVPDNMIQLDASSRFILNVSGVSTGLTAANSTLSLTEDDSATTIDLATLNSGN
PAGTTYAISSTTENLGDFALNGSVVTYTPDADAFGNGDQLVYTATDGTDTVTGTIAVTIA
GVNDPPTLVDDTATVEQGETAQIDVLANDSAGPGENNADLVLQSPATAITTANGGSAIIA
NGQISYTAPAGFSGSDSFTYTVADGALTATANVVVTVTNSQTGINAANKTVTIDEDNGGG
VTSEVLVADLSDDNLITINTGGTTITLDDAVITSGNGSVRIDGDQIFFTPAQDDFGTTTI
TYTASNDGTEGGSDTGVITVNITADNTDLTATADDFSVNEGATVTLDVLANDFDGPGESG
VLTITAVGTPNFGTATITQNGTRISYTSTGSAADGDDSFTYTISDGQGGTSTAVVNIDIQ
DVLDAPIAGNGSETIDEDSGTFTFNLNDLVTLEGTDSVTFSKVSGTDAIGTSTVAANGTL
TFNPVLNANGTATIVYRATSTQGSQLSDEGTLTISVTPVNDAPTATNRTVTVLEDNSIDI
DLNGNVADIDSTGLVITVASNPGNGTATAIGNGQIRYTPVADFNGQDSFTYQVTDGNLTA
TATVTVNVTDVVSPPVANNGSLSATEDAGAVTLDLSTLINLDSGDSATVTITTAPTNGTA
NVSGTSGDLTNSTLSYTPSADYFGSDSLVYTVTNSQGATDTGTISISVAGVNDAPVAGND
TATTVRNRAVTIDVLSNDSLGPANENQTATVTVPTQPANGTVTVNANNELVFTPATDFVG
TATITYQLSDGDLTDTATVEVTVNDFSPSVISGQLFVDGIMNIRDVIDNGADPVRNGVRD
PGETALGGVAVRLVSAASQNELGVDIDQVVLTNLDGEYTFEDVAPGSYQVIYNLPNNAVA
AGEAADGIIPIEIGSDGGASPVGSFAFATLGDAGQGNSSILSTNTNGGNGLPSGVDPGEG
GFINLVDGAQTMFLAGSGFDGVAYAELAMNRNNDAALLTIIEEDGDVRTAQVDGDHLRVN
RSGTSVQLLGGVDDFDFDASLEDLIESEYPAFRDAIDMILGNS
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaacgcgaagacccatcacatcgacccagcccaaccattcgaattgccgagaaaa
cagatgaaaaatctgcgtcaactgcttcgcagcgtgagcccgtcgtcatcacgaaagcga
agcgaagaccggtcgcgctctaaccgttcgaacaagcgtcgtctgctaagcgaatcgctt
gaaactcgacaattgctggctggtgacgtcccctcggtggtcgatgctgctccggaaggc
gaagccacatacgctgtcgctcacaactactggcgagcctacgacgttgacaacaacaaa
tatgtgacggcactggacgcgttgatggtgatcaatcacctcaacagtcatggcgaaggc
gagcccctgtcgggatccgatgagttcactggtttcgtcgatgtgaccggtgacaatcga
gtgacggccttggacgctctgagtgtcatcaatgctctgaatcgcggtgaaggcgaagcc
gacatgccgttggttgagtttgtgctggcagcccgcaacctggatgacacgctggtcgac
aacacgaccggcgcaaccgatgtccttcctgacgacaatgtcgaactgacctacaacgtc
gacgtcaacgaagtcttcaagttggaagtcggcgtcaaggatctgcgtgggttcagtgcc
acgggtgtcttccgagctgtcaccgacatcatcattgatcaatccgatgtgctcgagcca
gccgttggcgaagttcaaagcatcgtctttgacaacacggtcctaaactctccgctcgaa
ggcaatatcacgttctcgtttgcggacaatccgtccgttaccgtgacgcggtctttgaac
gacttcattggcggcagccttggcaatggttcgaacaatctcgaagagatcattgctcag
ctaagtcctctggtcggatcagctgatgatgtcgacgtgcaatcgagcatcaacacgagt
gcgggtggtccaagtggtggtggctcctacacgatggagatcaactacagcggtcctgac
ttgatcaacgtaaacatgcctcaattgcaggctgtcttagaggtcaacggaaccgcccaa
ccagtcaatctgtcgcagatcaacgttcagaatccggacggttctttcaatagcacccca
atccttcgtgcgttggaattgaacacgcggaatgcaggaaatgccggcgtctatgggcag
acccgttcgtttggctcgtttgagctcggcgaggacttgggaagcggtttggtcgatctc
ttcgatgaaattggcgtgctcggccctggcgacaaaagtttggctcaggagttgggctct
gagtacaatccaaatttggcttatgatgccttcagcattccagtccgtgccgttgtgccg
gcgactggcgtcagcgtgagcttggatgctcccgatgaaggtgacaaggttctgatttac
ggcaccgaagtcggaaaagagagcgtgcctgacaacatgattcagttggacgcttcatcg
cgattcattctgaatgtttccggtgtcagcaccggtttgactgctgcgaatagcacgctg
agtttgaccgaagacgattctgccacgacgatcgatttggcgacgctgaactcaggtaac
ccagccggaacgacctacgcgatctcatcgacgactgaaaacttgggtgacttcgctctc
aatggcagcgtcgttacctacacaccagatgccgatgcattcggcaatggcgatcaactg
gtttacactgcgacggacggaactgacaccgtcaccggcacgattgctgtcacgatcgcg
ggtgtgaatgatccaccaacgttggtcgacgacaccgcaaccgttgaacagggcgaaact
gctcagatcgatgtgctggccaacgatagtgctggcccaggcgaaaacaacgctgacttg
gtgcttcaaagcccggcgacggcgatcaccacggcaaatggtggttcggccatcatcgcc
aacggacaaattagctacaccgcaccggctgggttctctggttcggattcgttcacttac
accgttgctgacggtgcgttgacggcaaccgcgaacgtggtcgtcacggtcacgaacagc
caaaccggcatcaacgcggccaacaagaccgtcaccattgatgaggacaacggtggtgga
gtcacaagcgaagttttggtcgccgacctcagcgatgacaatctgatcacgatcaatacc
ggtggtaccactatcaccctggacgatgcggtcatcacatcaggaaatggcagcgtccgg
atcgacggtgaccagatcttcttcactccggctcaagacgatttcggtaccacgacgatc
acttacaccgccagcaatgacggtacggaaggcggcagtgacacaggcgtcatcaccgtc
aacatcacggccgacaacacggacctgaccgccacagcggatgacttcagtgtcaacgaa
ggtgcaacggttactttggatgtgctggcgaacgatttcgatggtccaggcgaatcgggc
gttttgacgatcactgcggtgggcactccgaatttcggaactgcgacaatcacccagaac
ggcacgcgaatcagttacacctcgaccggttcagcagccgatggcgatgactcgttcacc
tacaccatcagtgatggccaaggtggcacctcaacggccgtcgtgaacatcgacatccaa
gacgtcttggatgctccgattgctggcaacggatcggaaaccatcgatgaagactccgga
acgttcacgttcaacctgaacgatttggtcacgctcgaaggaaccgactcggtcaccttc
agcaaagtcagcggcaccgacgcaatcggaacatcgactgtcgcagcgaacgggacattg
accttcaatcctgttctgaacgctaacggcactgcaacaatcgtttatcgtgcgaccagc
acgcaagggtcgcagttgtccgatgagggcactctcacgatcagcgtgacaccagtcaac
gatgcacccacagccacgaaccgcaccgttacggtgttggaagacaacagcatcgacatt
gacctgaatggcaatgtcgctgacatcgatagcactggtttggtcatcaccgttgcgtcg
aatccgggcaacggaacggcaactgcgatcggcaacggccagattcgctacacgccagtt
gctgacttcaacggccaggattcgttcacctaccaagtcaccgatggcaacttgaccgcg
accgcgacggtcacggtcaatgtgaccgacgtggtatcgccaccggttgctaacaacggt
tcgttgtcggctaccgaagatgcgggagccgtgacgttggatctgtcgacgttgatcaac
ctggactcgggtgactcggcaaccgtcacgatcaccacagcacccaccaacggcacagcg
aatgtcagtggcacttcaggcgatttgaccaattcgacgctgtcctacacgccaagtgct
gattacttcggaagtgattcgctggtctacacggtcaccaactcgcaaggtgcgaccgat
accggcaccatcagtatctcagtggctggtgtgaacgatgctccagtcgcgggcaacgac
accgcgaccacggttcgcaaccgagcggttacgatcgacgtgctttcaaacgattcactt
ggaccagccaacgagaatcaaaccgcgacggttaccgtgcctactcaaccggccaacgga
acggtcacggtcaatgccaacaacgaactggtcttcacgccagcgacggactttgttggc
accgcgacgatcacttatcagctcagcgatggtgatttaaccgacactgcgaccgtggaa
gtcaccgtcaacgatttcagcccatcggtgatctccggtcagctgttcgtcgacgggatc
atgaacatccgcgatgtgatcgacaacggtgccgatccggtccgcaacggtgttcgcgat
ccgggtgagaccgctcttggtggcgtcgcagtccgtttggtgtcggccgcttcgcaaaat
gaattgggcgtcgatatcgatcaagtggtgctgacaaatttggacggtgaatacaccttc
gaagacgttgcaccgggcagctaccaagtgatttacaacttgcccaacaatgctgtcgcc
gccggtgaagcagccgacggaatcattccaatcgaaatcggttccgatggcggagcgtca
cccgtcggatcgttcgcctttgcgacattgggtgatgccgggcaaggcaacagttccatc
ttgtcgaccaataccaacggcggcaacggtttgccaagcggcgttgatccaggcgaaggt
ggattcatcaatctggtcgacggtgcacagacaatgttcttggccggtagcgggttcgac
ggagtggcttacgctgaattggcgatgaaccgcaacaatgatgcagccttgctcacgatc
atcgaagaagacggcgacgtccgtaccgctcaggtcgacggtgatcacttgcgagtgaac
cgaagcggcacatccgtccagttgctcggcggcgtggatgatttcgatttcgacgccagc
ctcgaagatttgattgaaagcgaataccccgctttccgagacgcgattgatatgatcctc
ggcaacagctga
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integrated database retrieval system
