Rhodopirellula baltica: RB8966
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Entry
RB8966 CDS
T00134
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB8966 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rba03019
]
RB8966 (groEL)
03110 Chaperones and folding catalysts [BR:
rba03110
]
RB8966 (groEL)
03029 Mitochondrial biogenesis [BR:
rba03029
]
RB8966 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rba04147
]
RB8966 (groEL)
Enzymes [BR:
rba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RB8966 (groEL)
Messenger RNA biogenesis [BR:
rba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RB8966 (groEL)
Chaperones and folding catalysts [BR:
rba03110
]
Heat shock proteins
HSP60 / Chaperonin
RB8966 (groEL)
Mitochondrial biogenesis [BR:
rba03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RB8966 (groEL)
Exosome [BR:
rba04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RB8966 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
RB8966 (groEL)
Exosomal proteins of breast cancer cells
RB8966 (groEL)
Exosomal proteins of colorectal cancer cells
RB8966 (groEL)
Exosomal proteins of bladder cancer cells
RB8966 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Toprim
Motif
Other DBs
NCBI-ProteinID:
CAD76018
UniProt:
Q7UM99
LinkDB
All DBs
Position
4777493..4779475
Genome browser
AA seq
660 aa
AA seq
DB search
MQQKTSLRYGDCYLRAPTNAFMPEWPNWIHRLSSSSCGTRAEHVRSTRTHSPVSFPLGIE
SVAASGSHLCDPPINREPLGSKPPQENYIVAKQIVFDDDARGPLLAGVSKLARAVRSTLG
PRGRNAVLDKGWGSPKVTKDGVTVAEDIELDDPFENLGAQLVKEAASKTNDVAGDGTTTA
TVLSEAIFREGLKMVATGADPMALSRGIQKAVDTAIAQIAKMATPINEKSKSDIKQVATI
AGNNDPQIGDVLADAFTKVGKNGVITVEEGRSNETYVDVVEGMQFDRGFLSPHFVTNQDE
VTVELDDCYILLFEEKISNNKKMIPLLEAISKAKKPLLIIAEDTEGEALATLVVNKMRGI
LSACAVKAPGYGDRRKAILGDIAALTGGKAIFKDLGIDLESVKVSDLGRAKQIRITSEAT
TIVGGAGKKADIEGRVAQIRREIEATDSDYDREKLQERLAKLAGGVAQINVGAATETEMK
ERKALIDDARAATQAALEEGIVPGGGTALLRCRAAVEKLEKATEGDQKLGVRIIRNVLDQ
PMRAIANNAGLDGAVVVNRVLQMKGKTEGYDANADKYCDLVAAGIVDPAKVVRTSLTNAA
SVAALLLTTESLVTEIPVEEEPAGGDHHDHGMGGGMPDMGGMGMGGMGGMGGMGGMGGMM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaaaaaacaagcctgcggtacggcgattgctacctgcgagccccaacgaacgcg
ttcatgcccgaatggccgaactggatccatcgactcagttcctcatcgtgcggcacacgt
gccgaacacgttcgctcgacccgaacacattcccccgtctctttccctcttggcatcgaa
tccgtggccgcctcgggctcgcacctttgcgatccgcccatcaaccgcgagcctctcgga
tccaaaccacctcaggagaactacatcgtggcaaagcagatcgttttcgacgatgacgca
cgcggcccattgcttgccggagtcagcaagctggcccgtgccgtccgcagcacacttggc
cctcgcggccgtaacgccgttctggacaaaggatggggttcgcccaaagtcactaaggac
ggcgtgaccgtcgccgaagacatcgaactggacgatccattcgaaaacctcggcgctcaa
ttggtcaaagaagccgccagcaagaccaacgacgtcgctggcgacggcaccaccaccgcc
actgtgctcagcgaagccatcttccgcgaaggcctgaaaatggtcgccaccggtgccgac
ccaatggcactctcgcgcggcattcaaaaagctgtcgacaccgcgatcgctcaaatcgcc
aaaatggcgaccccgatcaacgaaaagagcaagagcgacatcaagcaagttgccacgatc
gctggtaacaacgacccacaaattggtgacgtcctcgctgacgccttcaccaaggtcggc
aagaacggcgtgatcacggtcgaagaaggccgcagcaacgagacttacgtcgacgttgtc
gaaggcatgcaattcgatcgcggattcctgtcgcctcacttcgtcaccaaccaagacgaa
gtcaccgttgaactggatgactgctacatcctgttgttcgaagaaaagatcagcaacaac
aagaagatgattccgttgctggaagccatcagcaaagccaagaagccattgctgatcatc
gccgaagacaccgaaggcgaggctctcgccactttggttgtcaacaagatgcgtggcatc
ctgtcggcttgtgctgtgaaggctcctggctacggcgatcgccgcaaagccatcttgggc
gacatcgctgccctgaccggcggcaaggcgatcttcaaggacctcggcatcgacctggaa
agcgtcaaggtttccgacctcggtcgtgccaaacaaattcgcatcaccagcgaagcgacc
accatcgtcggcggtgctggcaagaaagctgacatcgaaggccgtgtcgctcaaatccgt
cgcgaaatcgaagcgactgacagcgattacgatcgcgaaaaactgcaagagcgtctggcg
aaactcgccggcggtgtggctcaaatcaacgttggtgccgcaaccgaaaccgagatgaag
gaacgcaaagcactcatcgacgacgctcgtgccgcaacacaagctgcactcgaagaaggc
atcgtccccggcggcggaaccgcactgcttcgatgccgtgctgctgttgaaaaactggaa
aaagcaaccgaaggcgatcaaaaactcggcgtgcgaatcatccgcaacgtgctcgaccag
ccaatgcgtgcgatcgccaacaacgctggcctcgacggagccgtcgtcgtcaaccgcgtg
cttcaaatgaagggcaagacggaaggctacgacgccaacgcagacaagtactgcgatctc
gttgctgccggcatcgttgaccccgccaaagtggttcgcacctcgctgaccaacgcagca
tcggttgccgctttgttgttgaccaccgaatctttggtcaccgaaatccccgtcgaagaa
gaaccagccggtggcgatcatcacgatcacggcatgggtggcggaatgccagacatgggc
ggcatgggaatgggtggcatgggaggaatgggaggcatgggtggaatgggcggcatgatg
taa
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