Rhodopirellula baltica: RB9570
Help
Entry
RB9570 CDS
T00134
Symbol
hyfR
Name
(GenBank) hydrogenase-4 transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
rba
Rhodopirellula baltica
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rba03000
]
RB9570 (hyfR)
Transcription factors [BR:
rba03000
]
Prokaryotic type
Helix-turn-helix
Other families
RB9570 (hyfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
AAA_2
AAA
HTH_8
Mg_chelatase
AAA_16
AAA_22
AAA_7
Torsin
HetE-N
Motif
Other DBs
NCBI-ProteinID:
CAD76342
UniProt:
Q7ULD5
LinkDB
All DBs
Position
5145205..5146848
Genome browser
AA seq
547 aa
AA seq
DB search
MQHNDISCILSPMIEHRIPLIRDHKKLLLAMPQQRSVADVLRLVVDHLASSHAVALARIW
LIQPGEGCPTCPMRSECPDQTECLHLVASAGTSVVDPNTDLSRIDGSFRRFPLGVRKVGR
IAATGTPLEVPNIDGDPDWLVHRDWALQESILGFGGQPLIHRGKVLGVLSVFARTTIGDA
CFDWLRMIADHVASAIANAQAWEEIESLRGRLELENDYLQEELRGEAFGEMIGQSDALQT
VTQQIRLVAPTDSTVLVMGESGTGKELVAREIHARSSRHEHPLIKVNCAAIPRELYESEF
FGHTKGSFTGALRDRIGRFELADGGTLFLDEIGEIPLDLQSKLLRVLQEGELERVGEERT
RMVDVRIIAATNRDLKAEAEAGKFRLDLYYRLSVFPIDLPPLRNRKDDLPLLADHLLTSL
SRRLGKPTPRLTRANANELQRYDWPGNIRELQHVLERALITSPPGKLKLNLASQPDIDSQ
NIVPVHSHEPDEIMTAAELRLFEANNIRKALQACGGKVYGETGAAALLGMKPTTLASRIK
SLGIASS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacacaacgacatctcgtgcatcctgtcacccatgatcgaacaccgaattcccctg
atccgtgaccacaagaaactgttgctggcgatgcctcaacagcggagcgtcgccgacgtt
ttgcgattggtcgttgatcatttggccagctctcatgcggtggccttggctcgcatctgg
ctgatccaaccgggcgaaggttgtcccacgtgcccgatgcgatcggagtgccccgaccaa
accgaatgccttcacttagtggctagtgcaggaacatcggtcgtggatcccaatacggac
ctcagccgcattgacggttcttttcgtcggttcccacttggcgtgcggaaagtcggacgc
atcgctgccaccgggactcctttggaagttcccaacatcgatggcgatcccgattggttg
gtgcatcgcgattgggccttgcaagaaagtattcttggatttggaggacaaccgctgatt
caccgcggcaaggtgctgggtgtactcagtgtcttcgctcgcaccacgatcggtgacgct
tgcttcgattggttgcgaatgattgccgaccacgtggcgtctgccatcgccaacgcgcag
gcttgggaagaaatcgaaagcctgcgaggacgtttggaactcgaaaacgattatctccaa
gaagagcttcgtggagaagcattcggtgagatgatcgggcaaagcgatgcgttgcaaacc
gtcacacagcaaattcgcttggtcgcaccgaccgactcgaccgtgttggtgatgggcgaa
agcggcactggcaaggaactggtcgcacgcgagattcatgctcgctcctctcgtcatgaa
cacccgttgatcaaagtcaactgcgcggcgattcctcgtgagctttatgagagcgagttc
tttggacacaccaagggcagcttcaccggcgctctacgtgatcgcattggccgctttgaa
ctggccgatggtggcactttgtttcttgacgaaattggcgaaatccccttggacctgcaa
agcaaacttctgcgggttctgcaggaaggcgaactggaacgcgtcggcgaagaacggact
cgcatggtggacgttcgaatcatcgccgccaccaaccgtgatttgaaggccgaagcggaa
gccggcaaattccgactcgatctctactaccgactcagtgtgttcccaatcgatttgcca
ccgcttcgaaatcgaaaagacgatctcccgctgctggccgatcacttgctcacgagcctt
tcccgacggcttggcaagccaacaccgagactcacgcgagccaacgccaacgaacttcag
cgttatgactggcccggcaacattcgcgaattgcaacacgtgctcgaacgagcgttgatc
acatctcctcccggtaaactgaaactgaatctcgcgtcacaacccgacatcgattcgcaa
aacatcgtccccgttcactcgcacgaacccgacgagatcatgaccgccgctgaactccgc
ttgttcgaggcaaacaacattcgcaaagcactgcaagcgtgtggaggcaaagtgtacggc
gagacgggtgccgccgctctactcggaatgaaaccgaccacccttgcatcacgaatcaaa
tcactcggcatcgcatcatcgtga
DBGET
integrated database retrieval system
