Rouxiella badensis subsp. acadiensis: H2866_04085
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Entry
H2866_04085 CDS
T06835
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_04085 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_04085 (rppH)
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H2866_04085 (rppH)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QOI56327
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Position
complement(887055..887582)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICDKQGQVLWARRYGQHSWQFPQGGINPGETAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNDADINMQRSSTPE
FDGWRWVSFWYPVRQVVSFKRDVYRRVMKEFSTTVMPMQEVPVNRTTPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtgacaagcagggg
caagtattatgggcccgtcgttatgggcagcactcctggcagtttccacaagggggaatc
aaccccggagaaacggctgagcaggccatgtatcgtgaactgtttgaagaagtgggacta
agtagaaaagacgtccgtattctggcttcgactcgcaactggttacgctataaattgcca
aaacgtttggtgcgttgggacacaaagccggtctgtatcggccaaaagcaaaaatggttc
ctgttacaactcatgtgtaatgatgcagacatcaatatgcaacgcagcagtacgcctgaa
tttgatgggtggcgctgggtgagtttttggtatccggttcgtcaggttgtttcatttaaa
cgtgacgtttatcgtcgggtaatgaaagagttttccacaactgtgatgccaatgcaggaa
gtacccgttaaccgtacaacccctgcttatcgtcggaaaagaggctaa
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