Rouxiella badensis subsp. acadiensis: H2866_04860
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Entry
H2866_04860 CDS
T06835
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad00330
Arginine and proline metabolism
rbad00480
Glutathione metabolism
rbad01100
Metabolic pathways
rbad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
H2866_04860 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
H2866_04860 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
H2866_04860 (speF)
Enzymes [BR:
rbad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
H2866_04860 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QOI56471
LinkDB
All DBs
Position
complement(1065255..1067414)
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AA seq
719 aa
AA seq
DB search
MKQLKIAASASVASHLDTPRGVVSLESADYTDVAAIVISVDDLNNGRLAAVEALGFSIPA
FVAVQGAEQVSPNYLSALKGVFALADANQAFYAAQLEAAADEYEQGLFPPFFDTLKKYVE
MENSTFACPGHQGGEFFRRHPAGRQFFEFFGENIFRSDMCNADVKLGDLLIHEGSAKDAQ
KHAAKVFSADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPFGFIGGIDAACFDERYLRKQIQEVAPERANEKRPFRLAIIQLGTYDGTVYNA
RQVVEKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDNHIKGQKRHCSHKKLNNAFMMHASTSPFYPLFAALDVNARMHAGGSGKHM
WMECVKLGIDTRKMLLNQCSMIQPFVPPLIDGKPWQDHDTEQMASDVRFFDFVPGERWHA
FAGYAEKQYFVDPCKLLLTTPGIDASSGKYTEFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAETPAKMQHLVQEIARFERYIAEDALLSEVLPTVYRKNEERYRDYTIRQLCQEMH
NLYVSFDVKELQKEMFREKGFPQVVMNPQDAHSEFIRDNVELVPISQAEGRIAAEGALPY
PPGVLCVVPGELWGGAVQRYFMALEEGINILPGFSPELQGVYVEKTVGWKRVMGYVIAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaatagcagcaagcgcctccgtggcatcccatcttgatacaccgcgt
ggcgtagtaagccttgaaagtgcggactacaccgacgttgcggcgatagtaatttccgtg
gatgaccttaataacggcaggctggcggcagttgaagccctgggattcagtatccctgcg
tttgttgcagtacagggagcggagcaggtttctccaaattatttgtctgcgctcaagggc
gtttttgccctggccgatgccaatcaggcgttctatgccgctcagcttgaagctgctgcc
gacgagtacgagcaggggctatttccgccgttcttcgacacgctgaagaaatacgtcgag
atggaaaattccacttttgcctgtccgggacatcagggcggggaatttttccgtcgtcat
ccggccggacgtcagttcttcgagtttttcggcgaaaacatcttccgttcggacatgtgc
aacgcggacgtgaagctgggcgatctgcttatccacgaaggatcggccaaagacgcgcag
aaacacgcggcgaaagtcttcagcgcagacaagacctattttgtgcttaacggcacctcg
gcggccaacaaggtggtgaccaacgcgttgctgacccgtggcgatctggtgctgttcgac
cgcaataaccacaagtcgaaccaccatggcgcgctgctgcaggcgggcgctacgccggtg
tatctcgaaacggcgcgtaacccgtttggcttcatcggcggtatcgacgcggcctgcttc
gacgagcgctatctgcgtaagcaaattcaagaggttgcgcctgagcgcgccaatgaaaaa
cgcccgttccgtctggcgattatccagctaggcacttacgacggcactgtttacaacgcc
cgtcaggtggtggagaagattggtcatctgtgtgactacatcctgtttgactcggcgtgg
gtcggctatgagcagttcatcccgatgatgaaagagtgttcgccgctgctgcttgagctg
aacgaaaacgacccgggaattatcgtcactcagtcggtgcacaaacagcaggccggtttc
tcccaaacttcgcaaattcataaaaaagataatcatatcaaaggccagaaacgccattgc
agccataaaaagctcaataacgcctttatgatgcacgcctcgaccagtccgttttacccg
ctgtttgccgcgctggacgtcaacgcgcgtatgcatgcgggcggcagcggcaagcatatg
tggatggagtgcgtgaagcttggcattgacactcgcaagatgctgctaaatcagtgctcg
atgatccagccgttcgtgccgccgctgattgacggtaagccgtggcaggatcacgacacc
gaacagatggcgagcgacgtgcgcttcttcgacttcgtgccgggcgagcgctggcacgcc
ttcgcgggctatgccgagaagcagtactttgtcgacccttgcaaactgttgctgaccacg
ccgggcatcgatgcaagcagcgggaaatacaccgagttcgggatcccggccaccattctc
gctaactacctgcgtgagaacggcatcgtgccagagaagtgcgacctgaactcgatcctg
ttcctgctgactccggctgaaacaccggccaagatgcagcacctggtgcaagagatcgcc
cgttttgaacgctatatcgcagaagatgcgctgctgagcgaagtactgccgaccgtgtat
cgcaagaatgaagagcgctaccgcgactacaccattcgtcagctttgtcaggagatgcat
aacctttacgtcagcttcgacgtaaaagagctgcaaaaagagatgttccgcgagaaaggc
ttcccgcaggtggtgatgaacccgcaggacgcgcacagtgaattcattcgcgacaacgtc
gagctggtgcccattagccaggccgaagggcgcatcgcggcggaaggcgcactgccttat
cctccgggcgtgctctgtgtggtgccgggcgaactgtgggggggcgcagttcagcgttat
ttcatggcgctggaagagggcataaatattctgccgggcttctcaccggaattgcagggt
gtgtacgttgagaaaacggtcggttggaagcgcgtgatgggttatgtcatcgccgagtaa
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