Rouxiella badensis subsp. acadiensis: H2866_05770
Help
Entry
H2866_05770 CDS
T06835
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_05770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_05770
03009 Ribosome biogenesis [BR:
rbad03009
]
H2866_05770
Enzymes [BR:
rbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H2866_05770
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H2866_05770
Ribosome biogenesis [BR:
rbad03009
]
Prokaryotic type
rRNA helicases
H2866_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
DRTGG
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QOI56637
LinkDB
All DBs
Position
complement(1266952..1268856)
Genome browser
AA seq
634 aa
AA seq
DB search
MTTELETSFADLGLSAPIISALTDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAA
FSLPLLHNIDASLKAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPA
EHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSITTRPDISQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPTAEVLGQRRLAKFAAKVQQQLESSDLDLYRGLLAKLQPEEELDIE
TLAAALLKMAQGERPLIVAADPVFKSRPPRREFEERGDRNDRRPARDGDRPAPREGDRPR
RERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFSSHSTIELPKGM
PGEILSHFTRTRILNKPMNMQLLGDAQPQSARRERPAGAAGERRGNGAPRSSFSGERREG
GRGRPFNGERREGGNSAAGERRPPSRAPRRTTDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagcttgaaacctcttttgctgacctggggctgtctgctcctatcatttct
gccctgaccgatctgggctacgaaaaaccatcaccgattcaggccgaatgtattcctcac
ctgttgagcggtcgtgatgttctgggtatggcccagaccggtagtggtaaaactgcagca
ttctcgctgccactgttgcacaacattgatgcttccctgaaagcaccacagattcttgtt
ttggcacctacccgcgaactggcggttcaggttgctgaagcgatgaccgatttctctaaa
cacatgcacggcgtgaacgttgttgcattgtacggcggccaacgctatgacgtgcagctg
cgcgcactgcgtcagggtccacaagttgttgtgggtacgcctggtcgtctgctggaccac
ctgaaacgcggcaccctgaacctctctaacctgagcggcctggtgctggacgaagccgat
gaaatgctgcgtatgggcttcatcgaagacgtagaaaccatcatggcgcagatcccggct
gaacatcagaccgcgctgttctctgcaaccatgccagaagcgattcgtcgtattacgcgt
cgcttcatgaaagatccacaggaagttcgcatccagtcaagcatcaccacgcgtccggac
atcagccagagctactggtctgtgtacggtatgcgtaaaaacgaagcactggttcgtttc
ctggaagcagaagattttgacgcagctatcatctttgttcgcaccaaaaacgcgaccctg
gaagtggctgaagcgctggagcgtagcggttatagctctgcggcactgaacggcgacatg
aaccaggccctgcgtgagcagactctggaacgtctgaaagacggtcgtctggatattctg
attgcaaccgacgtggcagcacgtggtctggacgttgaacgtatcagcctggttgtgaac
tacgatatccctatggattcagaatcctacgttcaccgtatcggccgtactggtcgtgct
ggccgtgcaggtcgcgcgctgttgttcgttgagaaccgcgaacgtcgtctgctgcgcaac
gtagaacgcaccatgaagctgactattccagaagtggaattgccaactgcagaagttctg
ggtcaacgtcgtctggccaagttcgccgccaaagttcagcagcagctggaaagcagcgat
ctggacctgtaccgtggactgctggctaaacttcagcctgaagaagagctggatattgaa
actctggccgcagcactgctgaaaatggctcagggcgaacgtcctctgatcgttgccgct
gatcccgtattcaaaagccgtccaccacgtcgtgagttcgaagagcgcggtgaccgcaat
gaccgtcgtccagcacgtgatggcgatcgtcctgcgccgcgtgaaggcgatcgtccacgt
cgtgagcgtcgtgacgcgggtgaaatggaactgtatcgcattgaagtgggccgtgatgat
ggcgttgaagttcgccacatcgtgggtgctatcgctaacgaaggcgatatcagcagccgt
tacatcggtaacatcaagctgttctcttcacactcaactatcgagctgccaaaaggtatg
ccgggcgaaattctgtctcatttcacccgtactcgcatcctgaataagccgatgaacatg
cagttgctgggcgatgcacagcctcagtcagcacgtcgtgagcgtccggctggtgccgct
ggtgagcgtcgtggtaatggtgctccgcgttcttctttcagcggtgagcgtcgtgaaggt
ggccgtggccgtcctttcaacggcgaacgtcgtgaaggtggtaactctgctgctggcgaa
cgtcgtccgccaagccgcgcaccacgtcgtactactgacgcataa
DBGET
integrated database retrieval system
