Rouxiella badensis subsp. acadiensis: H2866_05785
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Entry
H2866_05785 CDS
T06835
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_05785 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_05785 (pnp)
03016 Transfer RNA biogenesis [BR:
rbad03016
]
H2866_05785 (pnp)
Enzymes [BR:
rbad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H2866_05785 (pnp)
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H2866_05785 (pnp)
Transfer RNA biogenesis [BR:
rbad03016
]
Prokaryotic type
tRNA degradation factors
H2866_05785 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
aRib
OB_RRP5_4th
KH_SLS1_2
KH-I_KHDC4-BBP
S1_RRP5
DUF4172
Motif
Other DBs
NCBI-ProteinID:
QOI56638
LinkDB
All DBs
Position
complement(1270058..1272175)
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AA seq
705 aa
AA seq
DB search
MLKATVRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGKIPGSFFRREARPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSL
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELLESKLDLVVA
GTQGAVLMVESEAEVLSEEQMLGAVVFGHDQQQIVINEINALVAEVGKPKWDWQPEVVNA
DLQARIAAKSEALLGDAYRITDKQERYARVDAIKDEVTAALLAEDETLDAGEISDLLGAI
EKNVVRSRVLSGAPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTTR
DAQSLDELMGAKTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKFED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSSEGITALQMDIKIEGITREIMQAALSQAKGARLHILGVMNQA
ISESRGDISQFAPRIHTIKINADKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKISAT
DGEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLTMGQEVPVKVLEVDRQGRVRLSIKEATTPSEESATPAAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaaagcgacagttcgtaagttccaatacggtcaacatactgtgaccatcgaaacc
ggtatgatggcacgccaggccactgctgcagttatggtcagcatggacgacaccgcggta
ttcgttaccgttgttggccagaaaaaagctaaaccgggccagagcttcttccctctgacc
gtaaactaccaggagcgtacttacgctgccggtaaaattccaggaagcttcttccgtcgt
gaagcgcgtccaagcgaaggcgagaccctgacttctcgtctgatcgaccgtccaattcgc
ccactgttcccggacagcttcctgaacgaagtccaggttatcgcgaccgttgtttctctg
aacccgcaggttaacccagacatcgttgcgatgattggtgcctctgctgccctgagcctg
tctggtattccattcaacggcccaatcggtgcagctcgcgtgggttacattaacgaccag
tacgtgctgaacccaacggctgatgaactgcttgaaagcaaactggacttggttgttgcc
ggtacgcagggcgcggttctgatggttgaatcagaagcagaagtgctcagcgaagagcag
atgctgggcgctgtggtattcggccacgaccaacagcagatcgttatcaacgaaatcaat
gcactggttgctgaagttggcaaacctaagtgggattggcagccagaagtggttaatgct
gacctgcaagctcgcattgcggctaaatctgaagcgctgctgggcgacgcttaccgtatc
accgacaagcaagagcgttacgctcgcgttgacgccatcaaagatgaagttaccgctgca
ctgcttgccgaagacgaaaccttggacgctggtgagatctccgatctgctgggcgctatc
gagaaaaacgtcgtacgtagccgcgttctgagtggcgcaccgcgtatcgatggtcgtgaa
aaagacatgatccgtggtcttgatgttcgtactggcgtactgccacgtactcacggctct
tcactgtttactcgtggtgagactcaggcactggttaccgcaacgctggggactacccgt
gatgcgcagagcctggacgaactgatgggtgccaaaactgacaccttcctgttccactac
aacttccctccgtactccgtgggtgaaacaggtatggtcggttcgcctaagcgtcgcgaa
atcggtcacggccgtcttgccaagcgtggcgtactggcagtaatgcctaagtttgaagat
ttcccatacaccgttcgcgttgtatctgaaatcaccgaatctaacggttcatcttccatg
gcttccgtttgtggcgcatcactggccctgatggacgcaggtgtgccgattaaagccgcc
gttgcgggtatcgcgatgggtctggttaaagaaggcgaaaactttgtcgttctgtccgac
atcctgggtgacgaagaccaccttggtgatatggacttcaaagtagcaggcagcagcgaa
ggtatcactgcactgcaaatggatattaaaatcgaaggtatcacccgcgaaatcatgcag
gctgctctgagccaggccaaaggtgcacgtctgcacattctgggcgtgatgaaccaggca
atcagcgaatctcgcggcgatatctctcagttcgctccacgtattcacaccatcaaaatt
aacgctgacaagatcaaagacgtcatcggtaaaggtggttctgtaatccgtgcactgact
gaagaaaccggcaccactatcgaaatcgaagacgacggtactgttaaaatttctgcaacc
gacggcgaaaaagcgaaacacgctatccgtcgtattgaagaaattaccgccgaaatcgaa
gttggccgcatctaccagggtaaagttacccgtatcgttgactttggcgcgttcgttgcc
atcggtggcggtaaagaaggtctggttcacatctctcaaatcgctgacaagcgcgtagag
aaagtgactgactatctgacgatgggtcaggaagttccggttaaggttctggaagttgat
cgtcagggccgtgtgcgcttgagcattaaagaagcgaccaccccatctgaagaatcggca
actccagctgcagagtaa
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