Rouxiella badensis subsp. acadiensis: H2866_06190
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Entry
H2866_06190 CDS
T06835
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_06190 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_06190 (groL)
03110 Chaperones and folding catalysts [BR:
rbad03110
]
H2866_06190 (groL)
03029 Mitochondrial biogenesis [BR:
rbad03029
]
H2866_06190 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbad04147
]
H2866_06190 (groL)
Enzymes [BR:
rbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H2866_06190 (groL)
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H2866_06190 (groL)
Chaperones and folding catalysts [BR:
rbad03110
]
Heat shock proteins
HSP60 / Chaperonin
H2866_06190 (groL)
Mitochondrial biogenesis [BR:
rbad03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H2866_06190 (groL)
Exosome [BR:
rbad04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H2866_06190 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H2866_06190 (groL)
Exosomal proteins of breast cancer cells
H2866_06190 (groL)
Exosomal proteins of colorectal cancer cells
H2866_06190 (groL)
Exosomal proteins of bladder cancer cells
H2866_06190 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QOI56713
LinkDB
All DBs
Position
complement(1353036..1354682)
Genome browser
AA seq
548 aa
AA seq
DB search
MSAKDVKFGNDARVKMLNGVNILANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDVKRGI
DKAVVNAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAQAMEKVGKEGVITVEEG
TGLIDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDMGQAKRVVINKDTTIIIDGIGDETTIQGRVNQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVAHKLAGLKGDNEDQTVGIKVALRAMEAPLRQIVINAGEEASVIANNVKAGEGSYGYNA
YTEEYGDMIAMGILDPTKVTRSALQYASSVAGLMITTECMITDLPKDDKVDMGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaagatgtaaaattcggtaacgacgcccgcgtaaaaatgctgaacggcgtt
aacattctggctaacgcagttaaagtgaccttaggccctaaaggccgtaacgtcgttttg
gacaaatcttttggtgcgccaacgattactaaagacggcgtttctgttgcgcgtgaaatc
gaactggaagacaagttcgaaaacatgggcgctcagatggtgaaagaagttgcgtccaaa
gctaacgatgctgcgggtgacggtactacgactgcaaccgtgctggctcaggccatcatc
accgaaggtctgaaagctgttgctgccggtatgaacccaatggacgttaagcgcggtatc
gacaaagctgtcgttaacgcggttgaagagctgaaaaagctgtccgttccttgctctgac
tctaaagctatcgctcaggttggtactatttctgccaactccgacgaaaccgtgggcaaa
ctgattgctcaggcgatggaaaaagtaggcaaagaaggcgttatcaccgttgaagaaggc
actggcctgatcgacgagctggacgttgttgaaggtatgcagtttgaccgcggctacctg
tctccttacttcatcaacaagccagaaactggcgctgttgaacttgaaagcccgttcatc
ctgctggccgacaaaaaaatctccaacattcgcgaaatgctgccagttctggaagccgtt
gctaaagccggtaaaccactgcttatcgttgcagaagacgttgaaggtgaagcactggca
acgctggttgttaacaccatgcgtggcatcgtgaaagttgctgctgttaaagcaccaggc
ttcggcgaccgtcgtaaagctatgctgcaagacatcgcaaccctgaccggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcgaccctggaagacatgggtcaggct
aagcgcgttgttatcaacaaagacaccaccatcatcatcgatggtatcggtgacgaaacc
accattcagggccgcgtaaatcagatccgtcagcagatcgaagaagcgacctctgactac
gataaagaaaaactgcaagagcgtgtggctaaactggcaggcggcgttgccgttctgaaa
gtgggcgcagcgactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgccctg
cacgctacccgtgctgcggttgaagaaggcgtggttgccggtggtggtgttgcgctgatc
cgcgttgctcacaaactggctggcctgaaaggcgacaacgaagaccagaccgtaggtatc
aaagttgcactgcgtgcaatggaagcacctctgcgtcagatcgttatcaacgccggtgaa
gaagcttctgttatcgccaacaacgtgaaagcgggtgaaggcagctacggctataacgct
tacaccgaagaatacggcgatatgatcgcgatgggtatcctggatccaactaaagttacc
cgttctgctctgcagtacgcgtcttctgtagctggcctgatgatcaccaccgagtgcatg
attaccgacctgcctaaagacgacaaagtcgacatgggcggcgctggcggtatgggtgga
atgggcggcatgggcggcatgatgtaa
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