Rouxiella badensis subsp. acadiensis: H2866_07860
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Entry
H2866_07860 CDS
T06835
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbad03032
]
H2866_07860 (gyrB)
03400 DNA repair and recombination proteins [BR:
rbad03400
]
H2866_07860 (gyrB)
Enzymes [BR:
rbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H2866_07860 (gyrB)
DNA replication proteins [BR:
rbad03032
]
Prokaryotic type
DNA Topoisomerases
H2866_07860 (gyrB)
DNA repair and recombination proteins [BR:
rbad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H2866_07860 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QOI57013
LinkDB
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Position
complement(1707988..1710402)
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AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIL
VTIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYVHGEPQNPLKVVGETELTGTTVRFWPSFQTFTNHT
EFEYDILAKRLRELSFLNSGVAIRLHDKRDDKQDHFHYEGGIKAFVEYLNKNKNPIHPTV
FYFSTMKDDIGVEIALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKSKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVETLMNEKLVDY
LMENPGDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHIFIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIAMDGATLHTNASAPALAGEPLEKLVAEHYAVQKMIGRMERR
YPRALLNNLVYQPTLEETSLTDREKVQQWMEELVVLLNEKESHGSSYSAIVRENRERQIY
EPVLRIRTHGVDTDYDLDFDFIHGGEYRKLCALGQQLRGLIEEDAYIERGERRQPISTFE
QALEWLVKESRRGLSVQRYKGLGEMNPEQLWETTMDPDQRRMLRVTIKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctcaagtatcaaggtattaaaagggctggacgcggtgcgt
aagcgccccggcatgtatatcggcgataccgatgacggcactggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagccctcgctggccactgtaaagagattctg
gttacgattcatgcggataactccgtctccgttcaggatgatggtcgtggcattccaacc
ggcattcacgaagaagaaggcatctctgccgcagaagtcatcatgactgttcttcacgcc
ggcggtaaatttgacgataactcatacaaagtgtccggcggcctgcacggcgtgggtgta
tctgttgttaacgccctgtctgaaaagctggagttggttatccgtcgtgaaggtaaagtt
cacgaacaaacctacgtccacggcgagcctcagaatccactgaaagtcgttggcgagacc
gaactaaccggaacaaccgtacgcttctggccgagcttccagaccttcacaaaccatacc
gaattcgagtacgacatcctggccaagcgcctgcgcgagctgtcgttcctgaactccggc
gtggctatccgcctgcacgacaagcgtgatgacaaacaggatcacttccactacgagggc
ggcattaaggcgttcgtggaatacctgaacaaaaacaagaatccaatccacccgaccgtg
ttctatttctctaccatgaaagacgacatcggcgtggaaattgctctgcaatggaacgac
ggtttccaggaaaacatttactgctttaccaacaatattccacagcgtgacggcgggact
cacctcgccggtttccgtgcggcgatgacccgtaccctgaacgcgtacatggataaagaa
ggctacagcaagaaatccaaaatcagtgccaccggtgacgacgcccgtgaaggcctgatc
gccgttgtttctgtaaaagtgccggatcctaagttctcttctcagaccaaagacaagctg
gtgtcgtcagaagtgaaatcagcggttgaaaccctgatgaacgaaaagctggttgattat
ctgatggaaaacccgggcgacgcgaaaatcgttgtcggcaaaatcatcgatgcggctcgt
gcgcgtgaagcggcacgtaaagcccgtgaaatgacgcgtcgtaagggcgcgttggatttg
gccggtctgccgggcaaattggctgactgtcaggaacgcgatccggctcactccgaactg
tacctggtggaaggggactcggcgggcggatctgcgaagcagggccgtaaccgcaagaat
caggccattttgccgctgaaaggtaaaatccttaacgtcgagaaagcgcgtttcgataaa
atgctctcttctcaggaagtcgccacgttgattacggcgttgggctgcggcattggccgt
gacgaatacaacccggacaaactgcgctatcacagcatcatcatcatgaccgatgccgac
gtcgatggttcacacatccgaactctgctgctgaccttcttctatcgtcagatgcctgaa
atcgttgagcgcggccacatctttatcgctcagccgccgctgtacaaggtgaaaaaaggt
aagcaggaacagtacattaaagatgacgaagcgatggatcagtatcaaatcgccatcgca
atggacggcgcaacgctgcacactaacgccagcgcacctgccttggccggtgagccgctg
gagaagctggttgccgagcattacgcggtacagaaaatgattggtcgtatggagcgtcgc
tacccgcgtgcgctgttgaacaatctggtttatcagccaacgctggaagaaacttctctg
accgatcgtgaaaaagtgcagcagtggatggaagaactggtcgtgttgcttaacgaaaaa
gagtctcacggcagcagctacagcgctatcgtgcgtgaaaatcgtgagcgtcagatctac
gaaccggttctgcgtatccgtactcacggcgttgatactgattatgacctcgattttgat
ttcatccacggtggtgaataccgtaagctttgtgctctgggtcagcaacttcgcggcctg
atcgaagaagatgcctacatcgagcgcggcgaacgccgtcagccgatttccaccttcgag
caagcgctggaatggctggtgaaagagtcccgtcgcggtctgtccgtacagcgttataaa
ggtctgggcgaaatgaacccagaacagctgtgggaaacgaccatggatcctgatcagcgt
cgcatgctgcgcgtgaccatcaaagatgctatcgctgccgatcagctgttcaccacgctg
atgggagacgccgttgaaccacgccgcgctttcatcgaagaaaacgccctgaaagcagcg
aatatcgatatctaa
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