Rouxiella badensis subsp. acadiensis: H2866_08885
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Entry
H2866_08885 CDS
T06835
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_08885 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_08885 (rhlB)
Enzymes [BR:
rbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H2866_08885 (rhlB)
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H2866_08885 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QOI57201
LinkDB
All DBs
Position
complement(1927026..1928318)
Genome browser
AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLAVEALEKKGFHYCTPIQALALPITLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSNPAAEGRQTNQPRALIMAPTRELAVQIHSDAEALSESTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPPATQRLNMLFSATLSYRVKELAFENMNNAESIEIEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRVLE
DFTKGDIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGLSGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSSSSRRGGN
APRNNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaaccgaacagaagttttccgacttcgccctgcacccgctagca
gtcgaagcccttgaaaagaaagggtttcattactgcacgcctattcaggcactcgcattg
cctatcacgctctcaggacgtgatgttgcaggtcaggcgcaaaccggtaccggcaagacg
ctggcttttttagcgtctactttccattatctgctttctaacccggctgctgaaggtcgt
cagaccaatcagccacgtgctttaattatggcaccgacgcgggaattggcggtacaaatt
cattcggacgccgaagcgctctccgaatccaccggactgaaactcggtctggcctacggc
ggcgacggctacgacaaacagcttaaagtgctggaaagtggcgtcgatatcctgatcggc
acgactggccggttaatcgattacgcaaaacagaaccatattaatctgggtgcaatccag
gtcgtggtactggatgaagccgaccgcatgttcgacctcggttttatcaaagatattcgc
tggttgttccgccgcatgccgcctgcgactcaacgcctgaacatgctgttctcggcaacg
ctgtcctaccgcgttaaagagctggcgtttgaaaacatgaacaacgccgaatcgattgag
atcgaaccggaacagaaaacgggtcaccgcatccaggaagagcttttctatccttcaaac
gaagaaaagatgcgcctgctgcaaaccttaatagaagaagagtggccagaccgctgcatt
atcttcgccaacaccaagcaccgctgtgaagatgtctggggccacctggctgccgacgga
caccgcgtaggcctgctgaccggcgacgtggcgcagaaaaaacgcctgcgcgtgctcgaa
gacttcactaagggtgacatcgacattctggtcgcaaccgacgttgctgcccgtggtctg
cacattccagccgtgacccacgtcttcaactatgacctgcctgacgactgcgaagactac
gttcaccgcatcggccgtaccggtcgtgctggcctgagcggacactcaatcagcctggca
tgtgaagaatatgcgctgaatctgccggccatcgaaacctataccggccacagcattccc
gtcagtaaatacaacagtgatgcgcttctaaccgacctgccggcaccaaaacgtctggca
cgtacgcgcaccggcaacggcccacgccgtaattcatcttcatcacgacgcggtggcaat
gcaccacgtaacaaccgtaaacgttcgggctga
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