Rouxiella badensis subsp. acadiensis: H2866_09475
Help
Entry
H2866_09475 CDS
T06835
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad00730
Thiamine metabolism
rbad01100
Metabolic pathways
rbad01240
Biosynthesis of cofactors
Module
rbad_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
H2866_09475 (thiC)
Enzymes [BR:
rbad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
H2866_09475 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QOI57759
LinkDB
All DBs
Position
complement(2052131..2054014)
Genome browser
AA seq
627 aa
AA seq
DB search
MDSLQGVAFPNSKRIYLQGSRADIQVPMREIQLSPTMIGGTKDAPKFEDNEAIPVYDTAG
PYGDPQSNIDVHRGLDKIRASWIEARQDTEELPQVSSGFTQQRMADEGLDHLRFEHLPRP
RKAKAGKTVTQLHYARQGIITPEMEYIALRENMGRERIRGEVLLQQHPGESFGAHLPENI
TPEFVRAEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVW
STRWGADTVMDLSTGRYIHETREWIMRNSPVPIGTVPIYQALEKVNGVAEDLNWEMFRDT
LLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKESFLYLHFRE
ICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELQTLGELTKIAWEYDVQVMIEGPGHV
PMQMIRRNMTEELEKCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTP
KEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALD
PATARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDYAAALEAKAIPIDIVESGM
TQMSEAFRERGGELYHPADNIEEGVGK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atcgacagcctgcaaggcgttgccttcccaaattcaaaacgtatttatctgcagggtagc
cgcgccgatattcaggtgccaatgcgtgagatccagctcagcccgacgatgatcggcggt
accaaagacgctccaaagtttgaagacaatgaagcgatcccggtttatgacactgccgga
ccttacggcgatcctcaatccaacatcgatgtgcatcgcggcctggacaagatccgcgcc
agctggattgaggcgcgtcaggataccgaagagctgccgcaggtaagctccggttttacc
cagcaacgcatggccgacgaaggcctggatcatctgcgtttcgagcatctcccgcgcccg
cgcaaagcgaaagcggggaaaacggtcactcagctgcactacgcacgtcagggcattatc
accccggaaatggaatacatcgccctgcgtgaaaacatggggcgtgagcgtattcgcggt
gaagtgctgctgcaacagcatccgggagaaagctttggcgcccacctgccggaaaacatc
acgccagagtttgtccgtgccgaagttgcggccggtcgcgcgattatccccgccaacatc
aaccatcctgaatcagagccgatgatcattggccgtaatttcctggtcaaggtcaacgcc
aacatcgggaactcggcggtcacctcgtctatcgaagaagaagtcgagaaactggtatgg
tcgacccgttggggtgcggatacggtgatggacctgtcaaccggccgctacatccacgaa
acccgtgaatggattatgcgtaacagcccggttcctattggcaccgtgccaatctatcag
gcgctggagaaggttaacggcgtcgccgaagatctaaactgggagatgttccgcgatacc
ttgctggaacaggcagaacagggtgttgattactttactattcacgctggcgtgctgctg
cgctatgtgccaatgaccgctaaacgcctgaccggtatcgtgtcacgcggtggctccatc
atggcgaaatggtgtctgtcgcaccataaagagagtttcctttatctgcacttccgtgaa
atttgtgaaatctgcgctgcctacgatgtctcgctgtcgctgggtgatggcctgcgtccg
gggtcgattcaggacgccaatgacgaagcgcagtttgctgagctgcaaacgctgggcgag
cttaccaagattgcctgggagtatgacgtgcaggtgatgatcgaaggtccgggccacgta
ccgatgcagatgatccgccgcaacatgaccgaagagctggaaaagtgccacgaggcaccg
ttctatactctcggcccgctcaccaccgatattgcaccgggttatgatcacttcacctca
ggcattggcgccgcgatgatcggctggtttggttgcgcaatgctgtgctacgtcacgccg
aaagaacaccttggcctgccgaacaaagaggacgttaaacagggtttgattacctacaaa
atcgccgcacacgctgccgatctggccaaaggccatccgggcgcgcagatccgcgataac
gcgatgtcgaaggcacgcttcgaattccgctgggaagatcagttcaatctggcgctcgat
cccgcaacggcccgcgcctatcacgacgaaacgctgccacaggagtcgggtaaggtcgcc
catttctgctcgatgtgtggtccaaaattctgctcgatgaaaatcactcaggaagttcgc
gactacgccgctgcgctggaagccaaagctatcccgattgatatcgtcgagtcaggcatg
acacagatgtcggaagccttccgcgagcgcggtggcgaactgtaccatccggcagacaac
attgaagaaggagtcggtaaatga
DBGET
integrated database retrieval system