Rouxiella badensis subsp. acadiensis: H2866_11435
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Entry
H2866_11435 CDS
T06835
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbad03016
]
H2866_11435 (thpR)
Enzymes [BR:
rbad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
H2866_11435 (thpR)
Transfer RNA biogenesis [BR:
rbad03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
H2866_11435 (thpR)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QOI53621
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All DBs
Position
complement(2485908..2486450)
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AA seq
180 aa
AA seq
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MSESRRLFFALPLPTKLQKQVIKWRADSFEAEAGRPVAAANLHLTLAFLGDVSDAKARVL
SGIASRITSPTFSLTLDDLGHWPRPGVVWLGTRRAPLALLQLASLLRSHAARNGCYQSTL
PFHPHVSLLRGATRPVALPASTPEWQLDANEFSLYESQYHQGRTRYQCLQSWPLVASSPC
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcacgccgcctgtttttcgcccttcctttgccgaccaagctgcaaaagcag
gtgataaagtggcgcgccgacagttttgaggccgaggcggggcgtcctgttgcggcggcc
aatcttcatctgacgctggcctttctgggcgacgtcagcgacgctaaggccagggtgctg
agcgggattgcttcccgcataacgtcaccgacgtttagtttaacgcttgacgacctgggc
cactggccgcgcccgggcgttgtctggctaggcactcgacgtgcaccgcttgcgctcctg
caactggcctccctgctgcgctcacacgctgcgcgcaacggttgttatcagtcaacgctg
ccgtttcatccccacgtttccctgctgcgcggcgcaacgcgtccggtggcattgcccgcc
tcgacgcctgagtggcagctcgatgctaacgaattcagtctttacgagtcccagtatcat
cagggacgcacccgctatcagtgcctgcaaagctggccgttggtcgcgtcatccccttgc
taa
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