Rouxiella badensis: H2866_12425
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Entry
H2866_12425 CDS
T06835
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rbad
Rouxiella badensis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbad03400
]
H2866_12425 (sbcC)
DNA repair and recombination proteins [BR:
rbad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H2866_12425 (sbcC)
Archaeal homologous recombinant proteins
H2866_12425 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
cobW
TsaE
NTPase_1
AAA_22
GTP_EFTU
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QOI53794
LinkDB
All DBs
Position
complement(2706870..2710124)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLEGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LDVSPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAGNSPTGNLQAPKVELAQLAD
GKILADKVRDKLPAIAELTGLDFGRFTKSMMLSQGQFAAFLNAKANERAELLEELTGTEI
YGRLSAQVFERHKQAKVELDLLHQRAAGIELLNDEQRQQREQELAQLGLQETELSQQTAL
QQHGLNWLQQWQSNQQKQQQYRQHVADVAQQKQQAQPQLEQLARSEPAEKLRPLLNERSR
CQQQQTELQRQITQLSERQQQLQQAKNPLTQALGQALENQQQQAAEKQRQEELIEQQVQP
LDVKIEALQAKLNEDRESHLKQQNQLHALNESRKKWVSEQAASAEKTRQFQATEEALKAA
LNAQTQQHSVLEAQSPQATLRSQQAELARLRPVRLQLSTLQPLYQQLSQRIERQRQEYAA
RQNELTESEKQLSDAREQYKKQKQHLNDVEKLLAQEQLIVSLEAERARLQTGCPCPLCGS
TTHPAIEAYQAVSPSETALRVQKMREETDRLQTTGTQLRTRTEGLLEQQKRLQSALQQDE
KQQAEYLEQWQQACGSLTLGFTLQDGEALQHWLRECEEKEQQCQQLIRQHDDVVQAVQRA
KEALYAAQAEQAQVKEQAVVQNERALTLHKQHAEVQQQVEQLAKTLAESEQLLTQLRSQR
HSLFGEQQVKQVREHLRQQQQAAERARHQAHEQLQAVQQQLDQLGGQVLSLQQSQRQCET
DLLRAQTQWQQALASSAFADEEAVNAALIDESLRQQLQALKDRLSQQQVQSEALLQQASE
QLEQHLQSRPAGIDQHTSRADALAERIAALNAQLRTMQQRQGELRSQLESDSQRQAGQRA
LFTQIAQSQELYDDWSYLNQILGSSDGAKFRRFAQGLTLEHLVYLANRQMDKLHGRYLLQ
RKTSDALELEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSDKTRIDSLFLDEG
FGTLDADTLDTALDALDSLNASGKTIGVISHVEAMKDRIPVQIKVKKVNGLGISRLDNAF
KVND
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcctcagtctgcgcctaaaaaacctcaactcgctggaaggtgagtggaaaatc
gatttcaccgccgaaccctttgccagcaacggtctgtttgctattaccggcccgaccggg
gcggggaaaactaccctgctcgacgccatctgtctggcactttaccaccagacgccgcgc
cttgacgtctcgccgagccaaaatgagctgatgacccgccacaccgccgaatcgctggcg
gaggtggagtttgaggtcaagggcgttggctatcgggcgttctggagccagcgccgcgcg
gggaattctccgactggcaacctacaggcccccaaggtcgaactcgcgcagttggccgac
ggcaagatattggctgataaggtccgcgacaagctgccggctatcgccgaattgaccggc
ctcgacttcggccgtttcaccaaatcaatgatgctctcgcagggtcagttcgccgcgttt
cttaatgccaaggccaacgagcgcgcagaactgcttgaagagctgaccggcaccgagatt
tacggacgcctgtcggctcaggttttcgagcgtcacaagcaggcaaaagtcgagctagac
ctgctgcaccaacgcgccgcaggtatcgaactgttgaacgacgagcagcgccagcagcgg
gagcaggaactcgcgcagttgggcctgcaggaaaccgaattgagtcagcaaacggcactg
caacagcacggcctgaactggttgcagcaatggcaaagtaaccagcaaaagcagcaacag
taccgccagcatgttgccgacgtggcgcagcaaaaacagcaggcacagccgcagctcgag
cagcttgcccgcagtgaaccggccgaaaagctccgcccgttgctcaacgaacggtcgcgc
tgtcaacagcagcagaccgagttacagcgtcagataacgcagctgagtgaacggcaacaa
cagctgcaacaggcgaaaaacccgctcactcaggcgctgggtcaggcactagagaaccag
caacagcaggccgccgagaagcagcgtcaggaagagctgattgagcaacaggttcaaccg
ctggacgtcaaaatagaggctttacaggcgaagctaaacgaggaccgcgagtctcatctt
aagcagcaaaatcagctgcatgcgttgaacgagtcgcggaaaaagtgggtgtccgagcag
gcggcgtcggcggaaaaaacccgtcagtttcaggccactgaagaagcactcaaggccgcg
ttaaacgcccagactcagcagcacagcgtgctcgaggctcagtctccacaggccactttg
cgcagccaacaggcagagcttgccaggctgcgtccggtgcgcctgcaactttcaacccta
cagccactctatcaacaactgtcgcagcgtatcgaaaggcagcggcaggagtacgcggcg
cgccagaacgaactgaccgagtcagaaaagcagcttagcgatgcacgcgaacagtataaa
aagcagaaacagcatctcaacgatgtagaaaaactgctggcacaggagcagctgattgtt
agccttgaagcggaacgcgcacggctacaaaccggctgtccgtgcccgctgtgtggctcg
acgacgcatccggccatcgaggcctatcaggcagtcagcccctccgaaactgcgctgcgc
gtacagaaaatgcgtgaagaaaccgacagactgcagaccaccggcacacagctgcgcacg
cgcaccgaaggactgcttgagcagcaaaaacggctacaaagcgccctacaacaggacgaa
aaacaacaggctgaatatctcgaacagtggcagcaggcctgcggatcactgacccttggc
tttaccctgcaagacggcgaggcgctgcaacactggctcagggaatgtgaagaaaaagaa
cagcagtgccagcagttgatccgtcagcatgatgacgtcgtgcaggccgttcaacgcgcg
aaggaagcgttgtacgcagcgcaggccgaacaggctcaggttaaagaacaggccgtggtt
caaaacgaacgtgctctgacgctgcacaagcagcatgccgaggttcagcagcaggtcgag
cagttagccaagacactggccgaaagtgagcagttactcacgcaactgcgcagccagcgc
catagcctgtttggcgagcaacaggttaaacaggtccgcgaacacctgcgccaacagcaa
caggcagcagaacgggcgcgccatcaggctcatgagcaattgcaggcggtgcagcaacag
ctcgaccagctcggcggccaagtgctcagcctgcagcagagtcagcgccagtgcgagacc
gacctgctacgggcgcaaactcagtggcagcaggcgctggcgtccagcgcgtttgccgat
gaagaggccgttaatgcggcactgattgacgagtctttacgccagcagcttcaggcgctg
aaagaccggctcagccagcagcaagtccagagtgaggcgttgttgcagcaggccagcgag
cagttggaacagcatcttcagtcgcgcccagccggtatcgatcaacataccagccgggcc
gatgccctggcggaacggatagccgcgttgaacgcccagctgcgaacgatgcagcagcgt
cagggcgaactgcgcagccagcttgagagcgacagccagcgccaggccgggcaacgggcg
ctgtttacgcagattgcccagtcgcaggagctgtatgacgactggagctacctcaatcag
attcttggttcaagcgacggtgccaagttccgcaggtttgcacagggattaacgctggag
catctggtttatctggccaacaggcagatggacaaactgcacggtcgctacctgctgcag
cgcaaaaccagcgatgcactcgagcttgaagtggtcgatacctggcaggccgacgcagtg
cgcgatacccgcacgctctccggcggtgagagcttcctggtgagtctggcgctagcgttg
gcgctttcggatctggtcagcgacaaaacgcgcatcgactcgctgttcctcgacgaaggc
ttcggcacgctcgacgccgacacgctcgacaccgcgctggacgcactcgacagcctgaac
gccagtggaaaaaccatcggcgtaattagccacgtcgaggcgatgaaagaccgtattccg
gtgcagataaaagtgaagaaagtaaatggattagggatcagtcggctggacaatgcgttc
aaggtaaacgactag
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