Rouxiella badensis subsp. acadiensis: H2866_13460
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Entry
H2866_13460 CDS
T06835
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbad03400
]
H2866_13460 (phrB)
Enzymes [BR:
rbad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H2866_13460 (phrB)
DNA repair and recombination proteins [BR:
rbad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H2866_13460 (phrB)
Prokaryotic type
H2866_13460 (phrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QOI53982
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All DBs
Position
2931217..2932656
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AA seq
479 aa
AA seq
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MTTHLVWFRNDLRITDNRALAAACADVDATVIAVFIATPGQWRRHDMAPRQAAFIYQHLL
ALQSSLAERGIPLYYQQSELFSDAVDWLKAFVAEHKVDALFYNNQYEINEVARDAALDKA
LSTELTLHRFDDSLLLPPGSVTTGEGGMYKVYTPFRRAFLQRLSESDTRSLAAPQARNNP
YKGQSAPIKPFDYPQEEVGDDFPIGEEAARDRLRRFCRENVQDYLEQRDLPAIDGTSTLS
PYLAIGVLSPRQCLNRLRAEHPHALEKTDGGAFGWLNELVWREFYRHLLVAWPHLCKHKP
FIEWTDGVRWRDAPDDLKAWQAGKTGYPIVDAAMRQLNATGWMHNRLRMIVSSFLVKDLL
IDWRSGERYFMSQLLDGDLAANNGGWQWGASTGTDAAPYFRIFNPTTQGERFDKQGRFIK
AWVPELAEVPEKDIHHPHQWAEKQRRVLDYPHPIIDHARARKDTLAAFETAKSRAQADN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttggtctggtttcgtaatgatttacgcatcaccgacaaccgcgcactg
gctgccgcctgcgcagacgttgatgccactgttatcgcggtgtttattgccacgccgggg
cagtggcgcaggcacgacatggcgcctcgtcaggccgcgtttatttatcagcacctgctc
gcgttgcagtcttcgctggccgagcgcggtatcccgctttattaccagcagtccgagctg
ttttccgacgccgtcgattggctgaaggcgttcgtcgcagagcacaaggttgatgcgctg
ttttataataatcagtatgaaatcaacgaggttgcacgggatgctgcgttagacaaggcg
ttgtcgacagagcttaccctccaccgttttgacgacagcctgcttttgcctccgggttcg
gtaacgaccggtgagggcggcatgtacaaggtttatacgccgtttcgtcgcgcattttta
cagcgtctgagtgagtccgacactcgctcactggccgcaccgcaggcgcgtaacaacccg
tataaaggtcaatcagccccgattaagcccttcgactatccgcaggaagaggttggtgac
gattttcccataggcgaagaggccgctcgcgaccggctgcggcgtttctgtcgtgaaaat
gtgcaggactacctcgagcagcgcgacttgcccgccattgacggcaccagcacgctctct
ccgtaccttgccattggcgtactgtcgccgcgtcagtgccttaatcgcctgcgcgcggaa
catcctcacgcgttggaaaaaaccgacggtggcgcgtttggctggctcaacgagctggtc
tggcgtgagttttaccgccatttgctggttgcctggccgcatctttgcaagcacaaaccc
ttcatcgagtggacggacggcgtgcgctggcgcgatgctcctgacgatttaaaggcctgg
caggcgggtaaaaccggctatcccatcgttgacgccgccatgcgtcagttaaacgccacc
ggctggatgcacaatcgtctgcggatgatcgtctcgagctttctggttaaggacctgctt
atcgactggcgcagcggcgaacgctacttcatgtcgcagcttcttgacggcgatctcgcg
gccaacaacggcggctggcaatggggagcatcgaccggcaccgacgcggccccctacttt
cgcatcttcaacccgacgacgcagggagagcgtttcgacaagcaggggcgcttcatcaag
gcctgggttcctgagcttgccgaggtgccagaaaaagatattcaccacccacatcaatgg
gccgagaaacagcgccgcgtgctagactatcctcacccgattatcgatcacgcccgagca
cgcaaggatacccttgcggcgtttgaaaccgctaaaagtcgcgctcaggctgacaactaa
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