Rouxiella badensis: H2866_13850
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Entry
H2866_13850 CDS
T06835
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rbad
Rouxiella badensis
Pathway
rbad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H2866_13850 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbad03019
]
H2866_13850 (rhlE)
Enzymes [BR:
rbad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H2866_13850 (rhlE)
Messenger RNA biogenesis [BR:
rbad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H2866_13850 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QOI54051
LinkDB
All DBs
Position
3009360..3010760
Genome browser
AA seq
466 aa
AA seq
DB search
MSFDSLGLSADILRAVEEQGYTAPTPIQQQAIPVVLQGRDLMASAQTGTGKTAGFTLPVL
QMLSHTGDAQIKGRRPVRALILTPTRELAAQIGENVTAYSKYLKLRSLVVFGGVSINPQM
MKLRGGIDILVATPGRLLDLEHQNAVDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPA
KRQNLLFSATFSDEIKALAGKLLTNPASVEVARRNTASSQIEQSVHFVDKRRKRELLSQM
IGTGNWQQVLVFTRTKHGANHLAELLNKDGITAAAIHGNKSQGARTRALADFKDGGIRVL
VATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEAISLVCVDEHKLLRD
IERLLKREVPRIALPGYEPDPSIKAEPIVNGRQGGNGRGAPRQGAGGQRSGAPRQGGNGQ
RSGNGGNGSGESRPSSRPSRGSAANAGQRRSGANAGAARSRKPSGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagtgccgacattctgcgtgctgttgaagagcagggc
tataccgcgcctacgcctattcaacaacaggcaattcctgttgtgttgcaaggccgtgat
ttaatggctagcgcacaaactggtactggtaaaaccgctggctttaccctgcctgttttg
cagatgctgagccacactggcgacgcacagattaaaggtcgtcgtccggttcgcgcattg
attctgacgccaacccgcgaactggcggcacagatcggcgaaaacgtgacggcttacagc
aaatacctgaagctgcgttcgctggtggtatttggtggtgtgagcatcaacccgcaaatg
atgaaactgcgtggtggcatcgatattctggtggcaacaccgggacgcctgctggatctg
gaacaccagaacgccgttgacctgtccaaggttgagattctggttctggacgaagccgat
cgcatgctggacatgggcttcatccacgatattcgtcgcgtgctggcgaaactgcctgcc
aagcgtcaaaacctgctgttctctgcgactttctctgacgaaatcaaggcactggccggc
aaactgctgaccaaccctgcttccgttgaagtcgcgcgtcgcaacaccgcctcttcgcag
attgagcaaagcgttcacttcgttgacaagcgccgtaaaagagagctgctgtcgcagatg
atcggtaccggcaattggcagcaggtgctggtgtttacccgcaccaagcacggcgctaac
catctggccgagctgctgaataaagacggcatcaccgccgctgcaattcacggtaacaag
agtcagggcgcacgtacgcgtgcactggccgatttcaaagacggcggcattcgcgtattg
gttgcgaccgatatcgccgcgcgcggtctggacatcgaccagctgcctcacgtcgtgaac
tatgagctgccgaacgtccctgaagactacgtgcaccgcatcggtcgtaccggtcgtgca
gagtctaccggtgaagcgatttctctggtttgcgtcgatgaacacaagctgctgcgtgac
attgagcgtctgttaaagcgtgaggtcccacgtatcgctctgcctggttacgagccggat
ccgtctatcaaagccgagccgatcgttaacggtcgtcaaggtggcaacggccgtggcgca
ccgcgtcaaggcgccggtggccagcgttccggtgcccctcgtcagggtggtaacggtcag
cgcagcggcaatggcggtaatggttcaggcgaaagccgtccatcctctcgtccaagccgt
ggcagcgcagctaatgcgggtcagcgtcgttcaggcgctaacgccggtgctgcacgcagc
cgtaagccttcaggcgagtaa
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