Rouxiella badensis subsp. acadiensis: H2866_17775
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Entry
H2866_17775 CDS
T06835
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbad03016
]
H2866_17775 (rnd)
Enzymes [BR:
rbad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
H2866_17775 (rnd)
Transfer RNA biogenesis [BR:
rbad03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H2866_17775 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QOI54757
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All DBs
Position
3879283..3880404
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AA seq
373 aa
AA seq
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MNYQLIVSNEDLAKVCQQAQQFSQIALDTEFVRTRTYYPQLGLIQLFDGETLTLIDPLPI
TAWQPFIDLLIHPNVVKFLHAGSEDLEVFLNAFGVLPVPFIDSQILAAFSGRPLSCGFAR
LVAETTGVELDKSESRTDWMARPLTQKQCDYAAADVFYLLPLARQLEQETINAGWIDAAL
DECVSLCRRRQEVLQPERAYLEIGNAWQLRPRQLACLQKLAEWRLNQARQRDLAVNFVVR
EENLWQVARYQPHSLGELEALGLSGPEIRYHGRTLLALVAEAETLDESALPAPIANLIDQ
PGYKKVFKDIKALIQTVSEETGLSVELLASRRQINQLLNWHWQLKTKEHEPELVSGWRGT
LLRERLVTLLEQS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcgttagcaatgaagatctggcaaaggtttgtcagcaggcgcaa
cagtttagccagattgcgttggataccgaatttgtcagaacccgtacttactatccgcag
ttgggcctgatccagctctttgatggtgaaaccttaacgctgattgatcccttacctatt
actgcctggcagccatttatcgacttattgatccatcccaatgtggtcaagtttctgcac
gcgggcagcgaagatctcgaggtcttcctgaatgcctttggcgtgctgccggtgcctttc
attgacagccagatcctcgcggcctttagcgggcgtccgctctcctgcggttttgcgcgt
ctggttgccgagacaacgggcgtggaactcgacaagagcgagtcgcgtaccgactggatg
gccagacctttgacccagaagcagtgtgattacgccgctgccgacgtgttctatctgctg
ccgctggcacgtcagctcgagcaggaaaccattaatgcgggctggatagacgcggcactg
gacgagtgtgtctcgctctgccgccgccgtcaggaagtgctacagccggaacgggcttac
ctcgaaatcggcaacgcctggcagctgcgtccacgtcagttggcgtgtttgcagaaactg
gccgagtggcgtctgaatcaggcgcgtcagcgtgatttggcggtcaactttgtggtgcgt
gaagagaacctgtggcaggttgcgcgctatcagccgcattctctgggtgagcttgaagcg
ctcggcctgagcggtcctgagattcgctatcacggccgcacgctgctggcgctcgtcgct
gaagccgaaacgctggacgagtcggcactgcccgcaccgatcgctaacctgatagaccag
cctggctacaagaaagtcttcaaggacatcaaggcactgattcagacggtaagtgaagaa
acggggctcagcgtagagctgctggcgtcacgtcgccagataaaccagttgctgaactgg
cattggcagctgaagaccaaggaacatgaaccggagttggtgagcggatggcgcgggaca
ttgcttcgcgagaggctagtcacgctgctggaacagagttaa
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