Rouxiella badensis subsp. acadiensis: H2866_18240
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Entry
H2866_18240 CDS
T06835
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H2866_18240 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbad03400
]
H2866_18240 (xthA)
Enzymes [BR:
rbad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H2866_18240 (xthA)
DNA repair and recombination proteins [BR:
rbad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H2866_18240 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QOI54842
LinkDB
All DBs
Position
complement(3970853..3971662)
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AA seq
269 aa
AA seq
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MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQYGYHVYYHGQK
GHYGVALLTKEEPVAVRRGFPTDEEDAQRRIIMADIQTPQGLLTVINGYFPQGESRDHPT
KFPAKQRFYQDLQDYLQLQMSVENPVLVMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFL
PEEREWMERLKGWGLVDTFRHANPEVNDQFSWFDYRSKGFDDNRGLRIDLVLASTPLAAR
CKATGIDYAIRGMEKPSDHAPVWAEFDLK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgtctcttttaatatcaacggattgcgtgcccgtccccatcagcttgccgcg
attatcgaacaacatcagccagacgtcatcggcctgcaggaaacaaaagtccacgacgac
atgttcccgctcgaagaggtcagccagtatggctatcacgtctattaccacggtcaaaag
ggtcattatggcgttgcgctgttgaccaaagaagagccggtagcggtgcgtcgcggtttc
ccaaccgacgaagaagacgcgcagcgccgtatcatcatggccgacattcaaacgccacag
ggtctgttgaccgtgatcaacggctatttcccgcagggcgaaagccgcgaccatcccacc
aaattcccggccaaacagcgtttctatcaggatttgcaggactatttacagctgcaaatg
tcggtagagaacccggtgctggtgatgggcgacgtcaatatcagtccgacggacctggat
atcggtatcggtgaagacagtcgcaaacgttggttgcgtaccggtaagtgctcgttcctg
ccggaagagcgcgaatggatggagcgccttaagggctggggtctggttgacacgttccgt
cacgccaatcctgaagtcaacgaccagttctcatggttcgactatcgttcaaagggtttt
gacgacaaccgtggtctgcgtattgatctggtgttagcaagcacgccgctggcggctcgc
tgtaaggcaaccggcatcgattatgcgattcgcggaatggaaaaaccgtcggatcacgca
ccggtgtgggcagagttcgacctgaagtga
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