Rouxiella badensis subsp. acadiensis: H2866_18360
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Entry
H2866_18360 CDS
T06835
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad00040
Pentose and glucuronate interconversions
rbad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
H2866_18360
Enzymes [BR:
rbad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
H2866_18360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
QOI54865
LinkDB
All DBs
Position
complement(3998756..4000924)
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AA seq
722 aa
AA seq
DB search
MWESKVLIVALSCGISAQVLAGTVPEASSLIWHSITFGQSTDVNFATNVLQDKIGINETL
LADGKSVPTAGVKLATPFTLESRGGKIGNSHDGLTYFYTRLPADVNFQLEADVTLNQLGP
ENGAKPAGQEGAGLLVRNILGKARQPVTKPGVEELPAASNMVMNTVMAIGDEPQEVALIA
RQGVKHPWGNIGIGIVREAYHPLTTPAHFSLRLTRTDKGFEVSYAPESSHRWVSKTLNGA
DLITKLDKTGYYVGFFASRNARITVNHTKLILSAADTQPSPPYVAPPLEPHIEIMSSPVV
ASQNGIFQLRTNERGQIQIKMGEQTLLSQTAIGGGEAVAVPFHLQQPEGKINIEFIPDNA
KPLSRIFPVKRVPVSHPQRLYVSAKGAADNDGTRQHPLDFATAVNLLAPGGTLWMADGEY
PASEIPATASGTAKKPKTLRPESNNVVFNGLTLDASYWQIEGITVTQKSFHIAGSYNHIN
NVKAHNADDTGIWVASPEGIGRVLWASHNLISNSESWGNKDPGHKNADGFAVKMRVGEGN
RLVNCYSHDNIDDGFDLFNKIEDGPNGSVTIENSLSVHNGSNGFKLGGEGLPVAHVIRNN
VAVENGMDGFTDNFNPGALIVENNRAVDNKRFNFLFRPSPYTSADKQGTFKANISLRSSE
GRYNDVVSGNVDSSNYFYAYRRTVNALHQEIQPDSFISTRLPSPISRLPDGEFNYSNFLA
RK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaatctaaggtattgattgttgcgctgtcatgcggaataagtgcgcaagtcttg
gcgggtactgtgcctgaagcgagcagtctgatttggcacagcatcaccttcggtcagtcg
accgacgttaatttcgccaccaatgtcctgcaggataaaattggcatcaatgaaacgctt
ctggcggacgggaaatccgttcccacggccggtgtaaaacttgccacaccttttacgctg
gaaagtcgaggcggtaaaataggtaacagccatgacggcctgacttatttctatacacga
ctgccggctgatgtaaatttccagctggaagccgatgtcacgctgaatcaattaggtcct
gaaaacggggcaaaacctgccggacaggaaggtgccggattattagtacgcaatatcctg
ggcaaggcacggcaaccagtaaccaaacccggcgttgaggagcttccggcagcctccaat
atggtgatgaacacggtaatggcaatcggagatgagccacaggaagtagccttaatagcc
cgccagggagtgaaacatccatggggtaatatcggtataggtattgtgcgcgaggcctat
catcctttgacaacgcctgcacatttctctttgcgactgactcggaccgataaagggttt
gaggtctcctatgcgccagaaagcagccaccggtgggtaagtaaaactctcaatggcgct
gacctgattacaaagctggataaaacgggttattacgttgggtttttcgcctcgcgcaac
gcccgcattaccgttaaccataccaaactgatactcagcgcggccgatacccaaccgtct
ccgccttatgtcgcgccgcctctcgagccccatatcgagatcatgtcatcgcctgttgta
gcaagccagaacggcattttccagctgcgaaccaatgagcgcgggcagatacagatcaaa
atgggtgaacaaacgctgcttagccagacggctattggcggtggtgaagcggtcgctgta
ccatttcatctccaacaacccgagggcaaaataaacatagaatttatcccggataacgct
aaacccctgagccgcattttccctgtcaaacgggtgccggtgagtcatccgcagcggctt
tacgtttcagccaagggggcagcagataacgatggaactcggcaacatccgctggatttc
gcgaccgcagtcaacctgttagcccccggcggcacgctgtggatggctgacggtgaatac
cctgccagcgagatcccggcaacggcgagtggcacggcaaaaaaacctaaaacgctgcgt
ccggagagtaataacgtggtgttcaacgggcttaccctcgacgcaagctattggcaaatt
gaggggatcaccgtgactcaaaagagctttcacattgctggtagttataatcacatcaac
aacgttaaggcacataacgcagacgatacgggtatttgggttgcctcaccagagggtatt
ggacgcgtactttgggccagtcacaatctgataagcaattcagaatcctggggaaataaa
gatccggggcataaaaatgccgatggatttgcagtgaaaatgcgcgtaggagagggaaat
cgcctcgttaactgctactcgcacgataacatcgatgacggttttgatttgttcaacaag
attgaagacggtccgaacggcagcgtcacaatagaaaacagcctctcggtacacaacggc
agcaacggctttaaactcggcggcgaaggcctgcctgtcgctcatgttatccgcaataat
gttgccgtagaaaacggcatggacggcttcaccgataacttcaacccaggtgccctgatc
gttgaaaataatcgtgccgttgacaataaaagattcaacttcctgttccgtccttcaccc
tatacctcagcggataaacaaggaacttttaaagccaatatttcgctgagatcctcagag
ggcagatataacgatgtagtcagcggaaacgtagacagcagcaattatttctatgcctat
cgcagaacggtgaatgctttacatcaagagatccagcccgacagctttatttccacgcgg
cttccaagccccatttcacgtcttcctgacggagaatttaattactccaattttttagca
aggaaataa
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