Rouxiella badensis subsp. acadiensis: H2866_19845
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Entry
H2866_19845 CDS
T06835
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Pathway
rbad00550
Peptidoglycan biosynthesis
rbad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H2866_19845 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbad01002
]
H2866_19845 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbad01011
]
H2866_19845 (dacD)
Enzymes [BR:
rbad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H2866_19845 (dacD)
Peptidases and inhibitors [BR:
rbad01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
H2866_19845 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbad01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
H2866_19845 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
QOI55147
LinkDB
All DBs
Position
complement(4343040..4344209)
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AA seq
389 aa
AA seq
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MKRLVLSILSGVICVSASNAWAVAPIDFQVVPPSIDAASYVLMDYATGDVLASGNPDERR
NPASLTKLMTGYVIDRALDQHKITMDDVVTVPQEAWVAGNKVLAGSSLMFLKPGDRVTVR
NLIQGIIIDSGNDACVAMADYVAGSQDAFVGMMNQYVQKLGLTNSHFETVHGLDAPGQYT
TSYDLAKLSRAIIGGEPEEYHMYDEKTLTYDNITQNNRNGLLWDKNLNVDGLKTGHTETA
GFNIIASATEGNRRLIAVVMGGKSSKGREEQARKLLTWGFREFTSMQVFKAGQSVSTEKV
WFGDKPQIKVGSLDDVYLNIPQADSEKVKAQYVLNNQQIDAPLTKGQDVGTINIVDNGKV
IKTVPLVALEDLPKGGIVSRAIDYIKLKI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgtttagtattgagtattttgtccggtgtaatctgtgtttctgctagcaatgcg
tgggccgtagcaccgatcgattttcaggtagtgccacccagcattgatgctgcttcttat
gttcttatggattacgctaccggcgatgtactggcttccggaaatcctgacgagcgccgc
aaccctgccagcctgacaaaattgatgacaggatatgtcatcgaccgtgcgctggatcag
cataaaatcaccatggatgacgtggtgactgtgcctcaggaagcctgggtcgcaggcaac
aaagtgctggccggttcttcactgatgttcctcaaacctggcgaccgcgtgaccgtgcgt
aacctaattcagggcattatcatcgattctggtaacgacgcctgcgtggccatggctgac
tatgttgccggtagccaggacgcattcgttggcatgatgaaccagtacgtacaaaaactc
ggcctgactaactcacacttcgagaccgtacacggtctggatgcgccaggtcagtacacc
acgtcatacgaccttgctaagctttcgcgcgcgattatcggcggtgagcctgaggaatat
catatgtatgacgagaagacgcttacctatgacaacattactcagaacaaccgtaacggc
ctgctgtgggataaaaatctcaacgttgatggtctgaagaccggtcacaccgaaacggcg
ggcttcaacattatcgcgtctgcgacagaaggcaatcgccgtctgattgcggtggtaatg
ggaggcaaaagctcaaagggtcgtgaagagcaggcgcgtaagctgctgacctggggcttc
cgtgaatttaccagcatgcaggtattcaaagcgggccagagcgtttcgaccgagaaggtg
tggttcggtgataaaccgcagattaaggtgggtagccttgacgacgtatacctgaacatt
ccgcaggcagacagtgaaaaagtgaaggcgcagtacgtcttgaacaatcagcagattgat
gcaccgctgaccaaaggtcaggacgtgggaaccatcaatattgtggataacggtaaagtg
attaaaactgtgccactggttgcgctcgaagacttgccgaagggtggcattgttagccgc
gctatcgattacatcaaactgaaaatctag
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