Rouxiella badensis subsp. acadiensis: H2866_19860
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Entry
H2866_19860 CDS
T06835
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rbad
Rouxiella badensis subsp. acadiensis
Brite
KEGG Orthology (KO) [BR:
rbad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbad03016
]
H2866_19860
Enzymes [BR:
rbad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H2866_19860
Transfer RNA biogenesis [BR:
rbad03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H2866_19860
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QOI55150
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Position
4352258..4354195
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AA seq
645 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGIVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRV
IASVQTEKEREIVQPETLVEPFLSRFVGRVIKKDDRLSIMPDHPLLRDAIPCRTGRNFNH
EVNEGDWCVAEMRRHPLKEGDRGFQAELTEWITTGEDDLAPWWVTLARHNLEREAPEFDV
TELLEQGLTREDLTALPFVTIDSASTKDMDDALYVKDNGDGTLQLNIAIADPTAYVTEGS
DADNLARKRAFTNYLPGFNIPMLPRELSDNLCSLLPNERRPVLACSVTLSADGALGDDIR
FYAAWIESNAKLVYDEVSDWLEDVGEWQPQNETIAQQIRLLKRVCDVRSAWRTANALVFK
DRPDFRFVLGEKGNVLEIIAEHRRIANRIVEECMIAANVCAAIALRDNLGFGVYNVHNGF
DPLLVENAVAVLQANDVEADGPTLLTLPGFCDLRRKLDAMPTQFLDSRIRRFQTFAEIST
VPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAMITQQTAEKPQDEMTVQLAERRRLGR
MAERDVGDWLYARYLEDKVGTDTKFSAEIIDVTRGGLRVRLQDIGAVAFIPAPFLHAVRD
ELVCSQDTGTVLIKGEVAYRQSDIIDVNIAEVRMENRNVIAKPAA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctcgcacagctaaaacagcaacttcactctcagactccg
cgcgttgaaggcatcgtaaaaggaactgagaaaggctttggctttcttgaagtagacggt
caaaagagctatttcatcccacctccatacatgaaaaaagtcatgcatggcgaccgggtt
attgcttccgttcaaacagaaaaagagcgtgaaatcgttcaacctgaaacgctggtagaa
cctttcctcagccgttttgtgggccgcgtgatcaaaaaagacgatcgtctttcgatcatg
ccggaccatccgctgctgcgcgacgccattccatgccgcaccggccgtaacttcaatcat
gaagttaacgaaggtgactggtgcgtggcagaaatgcgccgtcacccgctgaaagaaggc
gatcgtggcttccaggccgaactgaccgagtggataaccaccggtgaagacgacctggcc
ccgtggtgggttaccctggcacgtcataacctcgagcgcgaagcgccagaatttgatgtg
actgaactgttggaacagggcctgacgcgtgaagacctgaccgccctgccgtttgttacc
atcgacagcgccagcaccaaggacatggacgatgccctctacgttaaagataacggcgac
ggcacactacaactgaatatcgccattgcggacccaacagcctacgtgaccgagggcagc
gacgccgacaatctggctcgcaaacgcgcgttcaccaactacctgccgggcttcaacatt
ccaatgttgccgcgtgaactgtccgacaacctgtgctcactgctgccaaatgaacgtcgc
ccggtgctggcgtgtagcgtgaccttgtctgccgacggcgcgctgggtgacgatattcgc
ttctacgctgcgtggatcgaatcaaacgccaaactggtttatgacgaagtttccgactgg
ctcgaagacgttggcgaatggcagccacagaatgagaccatcgcccagcagattcgtctg
ttaaagcgcgtgtgtgacgttcgctccgcatggcgtaccgccaacgcgctggtgtttaaa
gaccgtccagacttccgcttcgtgctgggtgagaaaggcaacgtgctggaaatcatcgcc
gagcaccgccgcatcgctaaccgcatcgttgaagagtgcatgattgctgccaacgtctgt
gccgctattgcgctacgcgacaacctcggtttcggcgtttataacgtgcacaacggtttc
gacccgctgctggttgagaacgcggttgccgtgctacaggccaacgacgttgaggcagac
ggcccaacgctgctgacgctgcctggcttctgcgacctgcgccgcaagcttgatgcgatg
ccaacgcagttcctcgacagccgcattcgtcgtttccagacctttgctgaaatcagcacc
gtgcctggtccgcacttcggcctgggccttgaggcttacgccacctggacatcgccaatc
cgtaaatacggcgatatggttaaccaccgcctgctgaaagcgatgattacccagcagacc
gccgagaagccacaggacgaaatgaccgttcaactggccgaacgccgccgtctgggtcgt
atggccgagcgcgacgtgggtgactggctgtacgcccgttacctggaagacaaagtcgga
accgacacaaaatttagcgccgagattatcgacgtcacccggggtggcctgcgcgttcgc
cttcaggacatcggcgccgttgccttcattcctgcgccattcctgcacgccgttcgcgac
gagctggtgtgcagccaggataccggcaccgtgcttatcaaaggtgaagttgcctatcgt
cagagcgacattatcgatgtcaacatcgctgaagttcgtatggaaaaccgcaacgtgatc
gctaaacctgccgcctaa
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