Rhizobium bangladeshense: J2J98_00135
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Entry
J2J98_00135 CDS
T07228
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rban03400
]
J2J98_00135 (addB)
Enzymes [BR:
rban01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2J98_00135 (addB)
DNA repair and recombination proteins [BR:
rban03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
J2J98_00135 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QSY88613
LinkDB
All DBs
Position
complement(25071..28265)
Genome browser
AA seq
1064 aa
AA seq
DB search
MAERHQPRILTIPAGLPFLKTLAVALCDGRLTPLFRHEADDPLSLAKVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFEEALPATIDLAQPLSNTSRLLELARLIL
AWRNKLPEIVRDIHSESPLVAPASPADAIWLARNLAELIDSIETEDLDWSELAKLDTGDY
AAWWQLTAEFLQIASAFWPERLSELGRSSPARHRNAILRAEAARISATKPSGPIIIAGST
GSVPATADLIAAVANLSEGVIVLPGLDLSMPERHWQMVAPEPAPGQHANPASRSHPQYGL
STLLKRLRLSRADIMLLDRPEADLDRRAEILSRALAPAEATSDWGAWKGELPGGALTSAF
GDVSLIEAANEREEATAIAIALRLALERPVQDGESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSATPQGTLLQLLLEATLRPGDPVAIVSLLKHPLARFGLERDALISATEALE
LLALRGGVSEVDISALELLLTHQLGEQALDRHAPEWRTALPAEAANAASELARRVTRATE
PLASALIRRRPEDRGKTARFTLSEWAERTGRSLEAVAADPEGNLADLWSHEAGDALASLL
GEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGSWPGQSANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEAALRERGNRYLQWAGLIDRGEAQSPAQRPSPKPPLALQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDAFNREPGAAERGTLYHKIIDRFIREAHAAGT
PEASAAMERILSELFDMERLPPHIDAVWRPRFRDVARAFLEWEAGRRPAIRRTLTEVRGG
VELETINIRLNGVADRIDITGPGAADIIDYKTGYNPSPAQARALLDPQLALEAAALSAGA
FRDAGSLAPQDLLYVRLRPGARFQVDTVNNENSARSDKAKSAMDLAGESVDQLIKFVSLL
QSGERGFTSRLIPAQQFDFGGDYDHLARVSEWSTAETEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaccagccacgcatcctgacgatcccggcgggccttcctttcctgaaa
accctggcagtggctctttgcgacggccggctgacgccgcttttccggcatgaggccgat
gatcccctgtcgctcgccaaggtaaccatctatctgccgacccgccgcgccgtacgcgtg
ctgcgctcggaattcgtcgatctgcttggcggccgctcggcaatcctgccggtgatccgt
cctctcggcgaaaccgatgatgacagcggatatttcgaagaggcgctgccggcaaccatc
gatctcgcccagccgctgtcgaatacctcccggctgctggaactggcgcgccttatcctt
gcctggcgaaacaaactgccggagatcgtccgtgatattcattcggaatcaccgctcgtt
gcgccggcaagcccggcggatgctatctggctcgcccgcaacctcgcggaactgatcgat
tccatcgaaaccgaggatctcgactggtcggaactggccaaactagacaccggcgactat
gccgcctggtggcagctgacggcagagttcctgcagatcgccagcgctttctggccggag
cggctttccgaactcggaaggtcttccccggcccgacacagaaacgccattcttagggcc
gaggcagccagaatttcggcgacgaaacccagcgggccgatcatcatcgccggttcgaca
ggttcggttcctgcgactgccgacctcatcgctgccgtcgccaatctctccgaaggcgtg
atcgtgctcccaggcctcgatctctccatgccggaaaggcattggcaaatggtcgcgccg
gaaccggcgcccggccagcatgccaatccggccagccggagccatccgcaatatggcctg
tcaacgctgctgaagaggctcagactgagccgggccgatatcatgctccttgacaggccg
gaggccgatctcgatcggcgcgccgaaatcctgtcgcgcgcgctcgccccggcggaagcg
accagcgactggggggcatggaagggcgagctgccggggggcgcgctgacttccgccttc
ggcgatgtttcgctgatcgaagccgccaatgaacgtgaggaagcaaccgcgatcgccata
gcgctcaggctggcgctggaaaggccggttcaggatggcgaaagccgggccgcgctgatc
acgccggaccgcaacctcgcccgtcgggtgatggcggaactttcccgcttcggcatcctg
gccgacgattcggccggcacgccactttccgccacgccgcaaggcaccttgctgcaactg
ctgttggaggcgacgctgcggccgggtgatccggtggcgatcgtgtcactgctcaagcat
ccgctggcgcgcttcggcctcgaacgcgacgccctgatttccgcgaccgaagcgctcgaa
ctgctggcgctgcgcggcggcgtgtcggaggtggatatcagtgcgctggagttgctcctg
acccatcaactcggcgagcaggctctcgaccgacacgcgccggaatggcgaacggcgctt
ccagccgaggccgccaatgccgcatccgagctcgcccggcgggttacccgcgcaaccgag
cctctcgcttccgcgctaatccggcgccggccggaagatcgcggcaagacggcacgtttc
acgctatccgaatgggcggagcggaccggccgttcgctcgaagcggtcgcggcagatccg
gaaggcaatcttgccgatctctggtcacatgaagcaggcgacgcccttgcctcgctcctt
ggcgaagtcatcgatacggatggccagatggaggccgacgggccgcagtggatcgacatc
atggccgcactcgccgccggccatgcggtgaagccacgggcgctcagccatccccgcctc
ttcatcttcggcacgctggaagcccgtctgcagagcgtcgacacactgattctcggaggc
ctgaacgaaggctcctggccagggcagagcgccaacaatcccttcattccgcggatgatg
aagacggagattggactcgaaccgccggagcggcgcatcggtcagctggcgcatgacttc
gagatggcgaacggcacccgccacctgatttattcgagagcactgcgccaaggttcgacg
ccgacagtcgcctcacgctggctgcagcggctgctggcgctgggcggagaggcatttgaa
gcggccttgagggagcgcggtaaccggtacctgcaatgggccggcctcatcgatcgggga
gaggcccagtcaccggcgcagcgaccctctccgaaaccaccgcttgcgctgcagccgaaa
tcctattccttcagcgaggtcgggcggctacgccgcgatccctatgccatctatgcccgc
cgcatcctgcggctcgatccggtcgacgcgttcaatcgcgagccgggagcggccgaacgc
ggaactctctatcacaagatcatcgaccggttcatccgcgaggcccatgcggccggcacg
ccggaggcctcagcggcaatggaacggatcctgagcgagcttttcgacatggaaaggctg
ccgccgcatatcgatgccgtctggcgcccgcgctttcgcgacgtggcccgtgccttcctc
gaatgggaagccggacgacgccccgctatccgcaggacgctgactgaagtgcgcggcggc
gtggagctggagacaatcaacatccggctcaacggcgttgcggaccggatcgacattaca
ggaccgggcgcggccgacattatcgactacaagaccggctacaatccttcaccggcacag
gcacgcgcgcttctcgatccgcagctcgcgctcgaagcggcggctttgagcgccggagcc
tttcgggatgccggcagtctggcgccgcaggatctgctctatgtccgcctccgtccggga
gcccggttccaggtcgatacggtgaacaacgaaaactcggcccgcagcgataaggcgaaa
tcggcgatggaccttgccggagaatcggtcgaccagctgatcaagttcgtcagtttgctg
cagtccggtgaaaggggctttacctcacggctcattccggcgcagcagtttgacttcggc
ggcgactacgatcatctcgcccgtgtctccgaatggtcgacggctgagactgaggaaggc
ggcggcgatgagtga
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