Rhizobium bangladeshense: J2J98_00480
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Entry
J2J98_00480 CDS
T07228
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rban
Rhizobium bangladeshense
Brite
KEGG Orthology (KO) [BR:
rban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rban03016
]
J2J98_00480
Enzymes [BR:
rban01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J2J98_00480
Transfer RNA biogenesis [BR:
rban03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J2J98_00480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QSY88674
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All DBs
Position
103411..104037
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AA seq
208 aa
AA seq
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MAATIRYHEGDISAADAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADIIRIAAG
QREAPNLVALLEDPTHQKIFHYGRFDIAVLFHTFGVTTSPVFCTKIASRLCRTYTDRHGL
KDNLKEMLDIDVSKAQQSSDWAAETLSPAQLEYAASDVLYLHALRDKLTARLIRDGRFDH
ATACFEFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatacgttaccacgaaggcgatatttccgcggccgatgcggcccgctat
accggcgcgatcgccatcgataccgagacactggggctggtgccgcggcgcgatcgtctc
tgcgtcgtccagctttctccgggtgacggcaccgccgacattatccgcatcgctgccggc
cagagagaagctcccaatctcgtcgctctgctcgaagatcccacgcatcaaaagatcttt
cactacggccgcttcgatatcgccgtgctcttccatactttcggcgtcacgacgagcccg
gttttctgcaccaagatcgcttcgcgcctctgccggacctacaccgatcgccacggcctg
aaggacaatctcaaggagatgctcgacatcgatgtctccaaggcgcagcaatcttccgac
tgggcggccgagacgctgtcgccggcccagctcgaatatgccgcttccgacgtgctttat
ctgcatgcgttgcgcgacaagctgacggcacgcctgatccgcgacggccggttcgaccat
gccacggcctgcttcgaattcctgccgacccgcgccaagctcgacctgctcggttgggaa
gaggccgatatcttcgctcacagctga
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